Hb_155764_010

Information

Type -
Description -
Location Contig155764: 1176-2066
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0044434
description zinc finger and btb domain-containing protein 11 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155764_010 0.0 - - -
2 Hb_003097_210 0.0638894621 - - PREDICTED: uncharacterized protein LOC105631194 isoform X1 [Jatropha curcas]
3 Hb_116898_010 0.0745929355 - - PREDICTED: uncharacterized protein LOC105639569 isoform X2 [Jatropha curcas]
4 Hb_027073_040 0.0768273994 - - TGF-beta-inducible nuclear protein, putative [Ricinus communis]
5 Hb_002301_230 0.0864707744 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
6 Hb_012114_040 0.0874248168 - - DNA binding protein, putative [Ricinus communis]
7 Hb_000010_470 0.087558414 - - Galactose oxidase/kelch repeat superfamily protein isoform 2 [Theobroma cacao]
8 Hb_000696_310 0.0896801752 - - PREDICTED: 40S ribosomal protein S4-3 [Jatropha curcas]
9 Hb_001881_020 0.0920300454 - - clathrin binding protein, putative [Ricinus communis]
10 Hb_000239_010 0.093212836 - - WD-repeat protein, putative [Ricinus communis]
11 Hb_003226_280 0.0936902071 - - PREDICTED: peter Pan-like protein [Populus euphratica]
12 Hb_004678_050 0.0937038644 - - PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase [Jatropha curcas]
13 Hb_000010_460 0.0937917749 - - hypothetical protein EUGRSUZ_B001502, partial [Eucalyptus grandis]
14 Hb_029866_020 0.0976265358 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
15 Hb_012675_060 0.0978902162 - - hypothetical protein PRUPE_ppa007715mg [Prunus persica]
16 Hb_000671_150 0.0983438588 - - PREDICTED: signal recognition particle 19 kDa protein-like [Jatropha curcas]
17 Hb_010080_090 0.0990350751 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Jatropha curcas]
18 Hb_001360_050 0.0993387489 - - PREDICTED: probable helicase MAGATAMA 3 isoform X1 [Jatropha curcas]
19 Hb_000503_050 0.0998878204 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Gossypium raimondii]
20 Hb_000028_140 0.100483801 - - surfeit locus protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_155764_010 Hb_155764_010 Hb_003097_210 Hb_003097_210 Hb_155764_010--Hb_003097_210 Hb_116898_010 Hb_116898_010 Hb_155764_010--Hb_116898_010 Hb_027073_040 Hb_027073_040 Hb_155764_010--Hb_027073_040 Hb_002301_230 Hb_002301_230 Hb_155764_010--Hb_002301_230 Hb_012114_040 Hb_012114_040 Hb_155764_010--Hb_012114_040 Hb_000010_470 Hb_000010_470 Hb_155764_010--Hb_000010_470 Hb_010560_040 Hb_010560_040 Hb_003097_210--Hb_010560_040 Hb_001688_020 Hb_001688_020 Hb_003097_210--Hb_001688_020 Hb_003226_280 Hb_003226_280 Hb_003097_210--Hb_003226_280 Hb_000363_200 Hb_000363_200 Hb_003097_210--Hb_000363_200 Hb_000865_070 Hb_000865_070 Hb_003097_210--Hb_000865_070 Hb_000239_010 Hb_000239_010 Hb_116898_010--Hb_000239_010 Hb_116898_010--Hb_027073_040 Hb_002471_080 Hb_002471_080 Hb_116898_010--Hb_002471_080 Hb_116898_010--Hb_003226_280 Hb_012675_060 Hb_012675_060 Hb_116898_010--Hb_012675_060 Hb_002759_060 Hb_002759_060 Hb_027073_040--Hb_002759_060 Hb_000270_370 Hb_000270_370 Hb_027073_040--Hb_000270_370 Hb_033834_040 Hb_033834_040 Hb_027073_040--Hb_033834_040 Hb_000028_140 Hb_000028_140 Hb_027073_040--Hb_000028_140 Hb_000058_060 Hb_000058_060 Hb_027073_040--Hb_000058_060 Hb_000696_310 Hb_000696_310 Hb_027073_040--Hb_000696_310 Hb_012779_100 Hb_012779_100 Hb_002301_230--Hb_012779_100 Hb_029866_020 Hb_029866_020 Hb_002301_230--Hb_029866_020 Hb_002056_060 Hb_002056_060 Hb_002301_230--Hb_002056_060 Hb_002216_040 Hb_002216_040 Hb_002301_230--Hb_002216_040 Hb_002301_230--Hb_003097_210 Hb_001663_050 Hb_001663_050 Hb_012114_040--Hb_001663_050 Hb_005568_120 Hb_005568_120 Hb_012114_040--Hb_005568_120 Hb_032208_060 Hb_032208_060 Hb_012114_040--Hb_032208_060 Hb_001519_050 Hb_001519_050 Hb_012114_040--Hb_001519_050 Hb_002061_040 Hb_002061_040 Hb_012114_040--Hb_002061_040 Hb_148209_110 Hb_148209_110 Hb_000010_470--Hb_148209_110 Hb_000010_460 Hb_000010_460 Hb_000010_470--Hb_000010_460 Hb_000010_470--Hb_002216_040 Hb_004678_050 Hb_004678_050 Hb_000010_470--Hb_004678_050 Hb_006400_030 Hb_006400_030 Hb_000010_470--Hb_006400_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.07162 2.85103 2.10069 2.23668 3.53508 6.62855
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0708 10.5581 10.9019 7.8742 2.16019

CAGE analysis