Hb_155911_010

Information

Type -
Description -
Location Contig155911: 79-627
Sequence    

Annotation

kegg
ID pop:POPTR_1809s00200g
description hypothetical protein
nr
ID KDP41933.1
description hypothetical protein JCGZ_26951 [Jatropha curcas]
swissprot
ID Q8RY17
description Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1
trembl
ID A0A067L3W8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26951 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155911_010 0.0 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
2 Hb_001142_020 0.0058814878 - - -
3 Hb_000362_230 0.0121787856 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_079543_010 0.0274045386 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
5 Hb_002141_010 0.0559057885 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
6 Hb_000227_110 0.0676198208 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
7 Hb_000204_180 0.095352502 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
8 Hb_002022_050 0.1169914419 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
9 Hb_002260_190 0.1247457189 - - -
10 Hb_128287_010 0.1364645984 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_000005_040 0.151979847 - - PREDICTED: histone H2B.2 [Jatropha curcas]
12 Hb_108404_010 0.1550592366 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
13 Hb_002232_200 0.1842140131 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
14 Hb_002673_050 0.2029235065 - - -
15 Hb_091369_010 0.2049219838 - - -
16 Hb_008473_010 0.205889397 - - PREDICTED: laccase-14-like [Jatropha curcas]
17 Hb_002900_060 0.2104565035 - - CI small heat shock protein 2 [Prunus salicina]
18 Hb_002595_100 0.2134494882 - - heat-shock protein, putative [Ricinus communis]
19 Hb_000944_010 0.2163884493 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
20 Hb_003400_030 0.2164850031 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_155911_010 Hb_155911_010 Hb_001142_020 Hb_001142_020 Hb_155911_010--Hb_001142_020 Hb_000362_230 Hb_000362_230 Hb_155911_010--Hb_000362_230 Hb_079543_010 Hb_079543_010 Hb_155911_010--Hb_079543_010 Hb_002141_010 Hb_002141_010 Hb_155911_010--Hb_002141_010 Hb_000227_110 Hb_000227_110 Hb_155911_010--Hb_000227_110 Hb_000204_180 Hb_000204_180 Hb_155911_010--Hb_000204_180 Hb_001142_020--Hb_000362_230 Hb_001142_020--Hb_079543_010 Hb_001142_020--Hb_002141_010 Hb_001142_020--Hb_000227_110 Hb_001142_020--Hb_000204_180 Hb_000362_230--Hb_079543_010 Hb_000362_230--Hb_002141_010 Hb_000362_230--Hb_000227_110 Hb_000362_230--Hb_000204_180 Hb_079543_010--Hb_002141_010 Hb_079543_010--Hb_000227_110 Hb_079543_010--Hb_000204_180 Hb_002141_010--Hb_000227_110 Hb_002141_010--Hb_000204_180 Hb_000227_110--Hb_000204_180 Hb_128287_010 Hb_128287_010 Hb_000227_110--Hb_128287_010 Hb_000204_180--Hb_128287_010 Hb_108404_010 Hb_108404_010 Hb_000204_180--Hb_108404_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.2797 0.0886793
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis