Hb_156182_010

Information

Type -
Description -
Location Contig156182: 1162-3042
Sequence    

Annotation

kegg
ID brp:103848240
description uncharacterized LOC103848240
nr
ID XP_012066591.1
description PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID W9QD67
description Uncharacterized protein OS=Morus notabilis GN=L484_012687 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156182_010 0.0 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
2 Hb_115940_010 0.2006272603 - - putative auxin-amidohydrolase precursor family protein [Populus trichocarpa]
3 Hb_001366_070 0.2309581853 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 4-like isoform X2 [Jatropha curcas]
4 Hb_006738_030 0.2605532924 - - Ras-related protein Rab7 [Morus notabilis]
5 Hb_021888_070 0.2614077496 - - Putative CCR4-associated factor 1 like 11 [Glycine soja]
6 Hb_002918_050 0.2696265209 transcription factor TF Family: SBP PREDICTED: mitochondrial arginine transporter BAC1-like isoform X1 [Jatropha curcas]
7 Hb_073866_010 0.2705269986 - - PREDICTED: N-alpha-acetyltransferase 20-like [Jatropha curcas]
8 Hb_054467_010 0.2732197284 - - -
9 Hb_000828_050 0.2774211982 - - unnamed protein product [Vitis vinifera]
10 Hb_001153_020 0.2787988712 - - PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo]
11 Hb_000252_110 0.2788813217 - - -
12 Hb_011310_080 0.2854444272 - - hypothetical protein POPTR_0006s26840g [Populus trichocarpa]
13 Hb_001171_050 0.2865537724 - - PREDICTED: uncharacterized protein DDB_G0284459 [Jatropha curcas]
14 Hb_000200_290 0.2875864185 - - PREDICTED: elongator complex protein 2 isoform X1 [Jatropha curcas]
15 Hb_001059_120 0.296502237 - - NADH dehydrogenase, putative [Ricinus communis]
16 Hb_000084_320 0.298506322 - - PREDICTED: probable small nuclear ribonucleoprotein G [Populus euphratica]
17 Hb_003849_270 0.2998899265 - - -
18 Hb_006153_040 0.3002362352 - - hypothetical protein PRUPE_ppa014788mg [Prunus persica]
19 Hb_006342_020 0.3003178887 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_000310_070 0.3013320463 - - BnaA06g08330D [Brassica napus]

Gene co-expression network

sample Hb_156182_010 Hb_156182_010 Hb_115940_010 Hb_115940_010 Hb_156182_010--Hb_115940_010 Hb_001366_070 Hb_001366_070 Hb_156182_010--Hb_001366_070 Hb_006738_030 Hb_006738_030 Hb_156182_010--Hb_006738_030 Hb_021888_070 Hb_021888_070 Hb_156182_010--Hb_021888_070 Hb_002918_050 Hb_002918_050 Hb_156182_010--Hb_002918_050 Hb_073866_010 Hb_073866_010 Hb_156182_010--Hb_073866_010 Hb_006342_020 Hb_006342_020 Hb_115940_010--Hb_006342_020 Hb_115940_010--Hb_073866_010 Hb_001163_090 Hb_001163_090 Hb_115940_010--Hb_001163_090 Hb_003124_060 Hb_003124_060 Hb_115940_010--Hb_003124_060 Hb_005054_270 Hb_005054_270 Hb_115940_010--Hb_005054_270 Hb_003849_270 Hb_003849_270 Hb_001366_070--Hb_003849_270 Hb_001493_120 Hb_001493_120 Hb_001366_070--Hb_001493_120 Hb_004136_030 Hb_004136_030 Hb_001366_070--Hb_004136_030 Hb_002042_080 Hb_002042_080 Hb_001366_070--Hb_002042_080 Hb_000828_050 Hb_000828_050 Hb_001366_070--Hb_000828_050 Hb_001059_120 Hb_001059_120 Hb_001366_070--Hb_001059_120 Hb_000928_130 Hb_000928_130 Hb_006738_030--Hb_000928_130 Hb_002026_120 Hb_002026_120 Hb_006738_030--Hb_002026_120 Hb_001240_020 Hb_001240_020 Hb_006738_030--Hb_001240_020 Hb_006738_030--Hb_003849_270 Hb_147752_010 Hb_147752_010 Hb_006738_030--Hb_147752_010 Hb_006738_020 Hb_006738_020 Hb_006738_030--Hb_006738_020 Hb_021888_070--Hb_002918_050 Hb_001153_020 Hb_001153_020 Hb_021888_070--Hb_001153_020 Hb_009838_010 Hb_009838_010 Hb_021888_070--Hb_009838_010 Hb_011310_080 Hb_011310_080 Hb_021888_070--Hb_011310_080 Hb_000169_140 Hb_000169_140 Hb_021888_070--Hb_000169_140 Hb_001171_050 Hb_001171_050 Hb_021888_070--Hb_001171_050 Hb_000052_020 Hb_000052_020 Hb_002918_050--Hb_000052_020 Hb_000997_360 Hb_000997_360 Hb_002918_050--Hb_000997_360 Hb_003734_110 Hb_003734_110 Hb_002918_050--Hb_003734_110 Hb_000125_210 Hb_000125_210 Hb_002918_050--Hb_000125_210 Hb_007747_210 Hb_007747_210 Hb_002918_050--Hb_007747_210 Hb_042202_030 Hb_042202_030 Hb_002918_050--Hb_042202_030 Hb_009644_040 Hb_009644_040 Hb_073866_010--Hb_009644_040 Hb_002918_040 Hb_002918_040 Hb_073866_010--Hb_002918_040 Hb_073866_010--Hb_006342_020 Hb_000252_110 Hb_000252_110 Hb_073866_010--Hb_000252_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0164292 0.0312034 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0903274 0.0710481 0.0657655 0.0427669 0.0731322

CAGE analysis