Hb_156212_010

Information

Type -
Description -
Location Contig156212: 181-576
Sequence    

Annotation

kegg
ID rcu:RCOM_0618970
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_012091048.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID Q9SD62
description Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1
trembl
ID A0A067L8N8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01311 PE=4 SV=1
Gene Ontology
ID GO:0000166
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156212_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_000340_170 8.49511e-05 - - PREDICTED: GDSL esterase/lipase At1g54790-like [Jatropha curcas]
3 Hb_000002_020 0.0007566873 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
4 Hb_004918_020 0.0024192192 - - -
5 Hb_003018_220 0.0027417957 - - Snakin-2 [Gossypium arboreum]
6 Hb_131748_010 0.0058838065 - - hypothetical protein PRUPE_ppa022115mg [Prunus persica]
7 Hb_001491_080 0.0063483362 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000803_280 0.0071958343 - - PREDICTED: uncharacterized protein LOC105648326 [Jatropha curcas]
9 Hb_000813_110 0.0129191438 - - PREDICTED: uncharacterized protein LOC104884346 [Beta vulgaris subsp. vulgaris]
10 Hb_000134_140 0.0141328071 - - lipid binding protein, putative [Ricinus communis]
11 Hb_004957_040 0.0174608501 - - PREDICTED: uncharacterized protein LOC104890338 [Beta vulgaris subsp. vulgaris]
12 Hb_037000_010 0.0193011743 - - PREDICTED: putative germin-like protein 2-1 [Jatropha curcas]
13 Hb_000397_180 0.020809843 - - -
14 Hb_102179_020 0.0221592702 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
15 Hb_158909_010 0.0222914575 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
16 Hb_003251_020 0.0230122529 - - Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Gossypium arboreum]
17 Hb_000107_690 0.0232445749 - - zinc finger protein, putative [Ricinus communis]
18 Hb_002007_030 0.0235706902 - - conserved hypothetical protein [Ricinus communis]
19 Hb_086639_110 0.0274870935 transcription factor TF Family: G2-like DNA binding protein, putative [Theobroma cacao]
20 Hb_000330_010 0.0276400316 - - hypothetical protein POPTR_0005s25020g [Populus trichocarpa]

Gene co-expression network

sample Hb_156212_010 Hb_156212_010 Hb_000340_170 Hb_000340_170 Hb_156212_010--Hb_000340_170 Hb_000002_020 Hb_000002_020 Hb_156212_010--Hb_000002_020 Hb_004918_020 Hb_004918_020 Hb_156212_010--Hb_004918_020 Hb_003018_220 Hb_003018_220 Hb_156212_010--Hb_003018_220 Hb_131748_010 Hb_131748_010 Hb_156212_010--Hb_131748_010 Hb_001491_080 Hb_001491_080 Hb_156212_010--Hb_001491_080 Hb_000340_170--Hb_000002_020 Hb_000340_170--Hb_004918_020 Hb_000340_170--Hb_003018_220 Hb_000340_170--Hb_131748_010 Hb_000340_170--Hb_001491_080 Hb_000002_020--Hb_004918_020 Hb_000002_020--Hb_003018_220 Hb_000002_020--Hb_001491_080 Hb_000803_280 Hb_000803_280 Hb_000002_020--Hb_000803_280 Hb_004918_020--Hb_003018_220 Hb_004918_020--Hb_001491_080 Hb_004918_020--Hb_000803_280 Hb_003018_220--Hb_001491_080 Hb_003018_220--Hb_000803_280 Hb_131748_010--Hb_000002_020 Hb_000134_140 Hb_000134_140 Hb_131748_010--Hb_000134_140 Hb_131748_010--Hb_004918_020 Hb_131748_010--Hb_003018_220 Hb_001491_080--Hb_000803_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0674209 0.323529 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis