Hb_156526_010

Information

Type -
Description -
Location Contig156526: 3702-4510
Sequence    

Annotation

kegg
ID rcu:RCOM_0724580
description hypothetical protein
nr
ID XP_012075446.1
description PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KSD0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10714 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156526_010 0.0 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
2 Hb_002045_140 0.1673113605 - - histone acetyltransferase, partial [Triticum aestivum]
3 Hb_003061_010 0.1737215897 - - hypothetical protein SORBIDRAFT_01g039870 [Sorghum bicolor]
4 Hb_126112_010 0.1789421303 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
5 Hb_003073_050 0.1871444718 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os03g0620400-like [Jatropha curcas]
6 Hb_005511_100 0.1889632957 - - PREDICTED: uncharacterized protein LOC105645493 isoform X1 [Jatropha curcas]
7 Hb_003297_010 0.1990204879 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
8 Hb_087762_010 0.1995314071 - - thioredoxin-like family protein [Hevea brasiliensis]
9 Hb_000025_060 0.2057912095 - - unknown [Populus trichocarpa]
10 Hb_008667_040 0.2144734906 - - glycerol-3-phosphate transporter family protein [Populus trichocarpa]
11 Hb_096490_020 0.2150963984 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
12 Hb_004241_040 0.2168901395 - - -
13 Hb_000302_160 0.2208526241 - - PREDICTED: uncharacterized protein LOC105648403 [Jatropha curcas]
14 Hb_012114_060 0.2221507542 - - PREDICTED: uncharacterized protein LOC105645814 [Jatropha curcas]
15 Hb_007123_060 0.2225069639 - - PREDICTED: uncharacterized protein LOC105634060 [Jatropha curcas]
16 Hb_007765_010 0.222547737 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004109_060 0.223205992 - - hypothetical protein POPTR_0019s12520g [Populus trichocarpa]
18 Hb_160203_010 0.22347637 - - -
19 Hb_000175_090 0.2236962143 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002253_040 0.2242328476 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]

Gene co-expression network

sample Hb_156526_010 Hb_156526_010 Hb_002045_140 Hb_002045_140 Hb_156526_010--Hb_002045_140 Hb_003061_010 Hb_003061_010 Hb_156526_010--Hb_003061_010 Hb_126112_010 Hb_126112_010 Hb_156526_010--Hb_126112_010 Hb_003073_050 Hb_003073_050 Hb_156526_010--Hb_003073_050 Hb_005511_100 Hb_005511_100 Hb_156526_010--Hb_005511_100 Hb_003297_010 Hb_003297_010 Hb_156526_010--Hb_003297_010 Hb_008667_040 Hb_008667_040 Hb_002045_140--Hb_008667_040 Hb_002045_140--Hb_003073_050 Hb_098546_010 Hb_098546_010 Hb_002045_140--Hb_098546_010 Hb_082407_010 Hb_082407_010 Hb_002045_140--Hb_082407_010 Hb_136765_010 Hb_136765_010 Hb_002045_140--Hb_136765_010 Hb_000230_040 Hb_000230_040 Hb_003061_010--Hb_000230_040 Hb_003061_010--Hb_126112_010 Hb_000891_040 Hb_000891_040 Hb_003061_010--Hb_000891_040 Hb_002151_080 Hb_002151_080 Hb_003061_010--Hb_002151_080 Hb_005839_050 Hb_005839_050 Hb_003061_010--Hb_005839_050 Hb_000523_100 Hb_000523_100 Hb_126112_010--Hb_000523_100 Hb_000025_100 Hb_000025_100 Hb_126112_010--Hb_000025_100 Hb_021888_110 Hb_021888_110 Hb_126112_010--Hb_021888_110 Hb_003581_010 Hb_003581_010 Hb_126112_010--Hb_003581_010 Hb_006018_070 Hb_006018_070 Hb_003073_050--Hb_006018_070 Hb_003073_050--Hb_005511_100 Hb_171554_090 Hb_171554_090 Hb_003073_050--Hb_171554_090 Hb_004241_040 Hb_004241_040 Hb_003073_050--Hb_004241_040 Hb_007441_210 Hb_007441_210 Hb_005511_100--Hb_007441_210 Hb_009486_150 Hb_009486_150 Hb_005511_100--Hb_009486_150 Hb_007229_070 Hb_007229_070 Hb_005511_100--Hb_007229_070 Hb_000565_030 Hb_000565_030 Hb_005511_100--Hb_000565_030 Hb_007558_010 Hb_007558_010 Hb_005511_100--Hb_007558_010 Hb_017469_020 Hb_017469_020 Hb_005511_100--Hb_017469_020 Hb_000175_090 Hb_000175_090 Hb_003297_010--Hb_000175_090 Hb_087762_010 Hb_087762_010 Hb_003297_010--Hb_087762_010 Hb_012114_060 Hb_012114_060 Hb_003297_010--Hb_012114_060 Hb_007778_020 Hb_007778_020 Hb_003297_010--Hb_007778_020 Hb_003297_010--Hb_007558_010 Hb_004137_030 Hb_004137_030 Hb_003297_010--Hb_004137_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.09907 3.28667 3.21949 1.56031 1.84644 11.7137
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.20402 5.20363 0 0.413992 0.322841

CAGE analysis