Hb_156635_050

Information

Type -
Description -
Location Contig156635: 21779-26628
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP42289.1
description hypothetical protein JCGZ_01613 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01613 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156635_050 0.0 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
2 Hb_000330_180 0.2559191113 - - -
3 Hb_003554_020 0.2562719742 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
4 Hb_007524_050 0.3200855832 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]
5 Hb_007189_020 0.3470557538 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
6 Hb_001221_010 0.3578660523 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000181_040 0.3673480357 transcription factor TF Family: NAC PREDICTED: protein CUP-SHAPED COTYLEDON 2 [Jatropha curcas]
8 Hb_002609_180 0.3801632351 - - -
9 Hb_029580_010 0.3956926787 - - PREDICTED: uncharacterized protein LOC105633393 [Jatropha curcas]
10 Hb_004375_070 0.4034965127 - - PREDICTED: proline-rich protein 1-like [Jatropha curcas]
11 Hb_000563_310 0.4050437868 transcription factor TF Family: ERF ethylene-responsive transcription factor 3 [Hevea brasiliensis]
12 Hb_009780_090 0.4055487091 - - PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Jatropha curcas]
13 Hb_000227_030 0.4088540686 - - -
14 Hb_014556_020 0.4106470221 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_022500_010 0.4106610367 - - -
16 Hb_001754_220 0.4111559608 - - -
17 Hb_001377_390 0.4138189702 - - hypothetical protein POPTR_0002s17390g [Populus trichocarpa]
18 Hb_003812_010 0.4139536712 - - -
19 Hb_012656_010 0.4150642049 - - -
20 Hb_001263_020 0.4152148696 - - -

Gene co-expression network

sample Hb_156635_050 Hb_156635_050 Hb_000330_180 Hb_000330_180 Hb_156635_050--Hb_000330_180 Hb_003554_020 Hb_003554_020 Hb_156635_050--Hb_003554_020 Hb_007524_050 Hb_007524_050 Hb_156635_050--Hb_007524_050 Hb_007189_020 Hb_007189_020 Hb_156635_050--Hb_007189_020 Hb_001221_010 Hb_001221_010 Hb_156635_050--Hb_001221_010 Hb_000181_040 Hb_000181_040 Hb_156635_050--Hb_000181_040 Hb_000330_180--Hb_007189_020 Hb_000330_180--Hb_003554_020 Hb_155932_010 Hb_155932_010 Hb_000330_180--Hb_155932_010 Hb_000330_180--Hb_000181_040 Hb_179763_020 Hb_179763_020 Hb_000330_180--Hb_179763_020 Hb_001377_390 Hb_001377_390 Hb_003554_020--Hb_001377_390 Hb_014556_020 Hb_014556_020 Hb_003554_020--Hb_014556_020 Hb_000252_140 Hb_000252_140 Hb_003554_020--Hb_000252_140 Hb_000359_240 Hb_000359_240 Hb_003554_020--Hb_000359_240 Hb_062135_010 Hb_062135_010 Hb_003554_020--Hb_062135_010 Hb_000788_050 Hb_000788_050 Hb_007524_050--Hb_000788_050 Hb_002391_090 Hb_002391_090 Hb_007524_050--Hb_002391_090 Hb_012094_030 Hb_012094_030 Hb_007524_050--Hb_012094_030 Hb_005489_010 Hb_005489_010 Hb_007524_050--Hb_005489_010 Hb_007524_050--Hb_003554_020 Hb_000917_250 Hb_000917_250 Hb_007189_020--Hb_000917_250 Hb_007189_020--Hb_000181_040 Hb_007189_020--Hb_155932_010 Hb_031089_060 Hb_031089_060 Hb_007189_020--Hb_031089_060 Hb_000866_160 Hb_000866_160 Hb_007189_020--Hb_000866_160 Hb_000364_110 Hb_000364_110 Hb_001221_010--Hb_000364_110 Hb_149731_010 Hb_149731_010 Hb_001221_010--Hb_149731_010 Hb_152439_010 Hb_152439_010 Hb_001221_010--Hb_152439_010 Hb_000025_130 Hb_000025_130 Hb_001221_010--Hb_000025_130 Hb_001221_010--Hb_000181_040 Hb_000181_040--Hb_149731_010 Hb_000236_270 Hb_000236_270 Hb_000181_040--Hb_000236_270 Hb_058884_010 Hb_058884_010 Hb_000181_040--Hb_058884_010 Hb_000181_040--Hb_000917_250 Hb_000181_040--Hb_155932_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00714669 0.00738625 0.0476018 0.0437576
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.120559 0 0.0137003 0

CAGE analysis