Hb_156850_030

Information

Type -
Description -
Location Contig156850: 16649-23946
Sequence    

Annotation

kegg
ID rcu:RCOM_1600650
description receptor protein kinase, putative
nr
ID XP_012073679.1
description PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
swissprot
ID Q944A7
description Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1
trembl
ID A0A067KKR9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08122 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase at4g35230

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13644: 16633-23915
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156850_030 0.0 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
2 Hb_000032_320 0.0509322811 - - protein binding protein, putative [Ricinus communis]
3 Hb_001728_100 0.060043766 - - hypothetical protein JCGZ_03429 [Jatropha curcas]
4 Hb_000953_010 0.075703199 - - hypothetical protein CISIN_1g0425012mg, partial [Citrus sinensis]
5 Hb_000059_210 0.0759600406 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004204_080 0.0834487257 - - diacylglycerol kinase, theta, putative [Ricinus communis]
7 Hb_000077_070 0.0841011876 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
8 Hb_005307_030 0.0877587026 - - hypothetical protein POPTR_0006s04640g [Populus trichocarpa]
9 Hb_000997_090 0.0880610229 - - PREDICTED: uncharacterized protein LOC105632095 [Jatropha curcas]
10 Hb_001623_420 0.0881987394 - - nucleotide binding protein, putative [Ricinus communis]
11 Hb_006400_040 0.0885179527 - - PREDICTED: uncharacterized protein LOC105642527 [Jatropha curcas]
12 Hb_000270_780 0.0897941751 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]
13 Hb_175338_030 0.0903084962 - - PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
14 Hb_002027_260 0.0904093415 - - PREDICTED: gibberellin receptor GID1B [Jatropha curcas]
15 Hb_004734_060 0.093172135 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 32 isoform X1 [Jatropha curcas]
16 Hb_002307_100 0.0932932003 - - PREDICTED: protein transport protein sec23-1 [Jatropha curcas]
17 Hb_001541_020 0.0935974839 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
18 Hb_022408_010 0.0959233338 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
19 Hb_010175_020 0.0959769582 - - PREDICTED: cysteine desulfurase, mitochondrial isoform X1 [Jatropha curcas]
20 Hb_000803_190 0.0961957733 - - PREDICTED: THUMP domain-containing protein 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_156850_030 Hb_156850_030 Hb_000032_320 Hb_000032_320 Hb_156850_030--Hb_000032_320 Hb_001728_100 Hb_001728_100 Hb_156850_030--Hb_001728_100 Hb_000953_010 Hb_000953_010 Hb_156850_030--Hb_000953_010 Hb_000059_210 Hb_000059_210 Hb_156850_030--Hb_000059_210 Hb_004204_080 Hb_004204_080 Hb_156850_030--Hb_004204_080 Hb_000077_070 Hb_000077_070 Hb_156850_030--Hb_000077_070 Hb_000032_320--Hb_001728_100 Hb_002301_220 Hb_002301_220 Hb_000032_320--Hb_002301_220 Hb_001541_020 Hb_001541_020 Hb_000032_320--Hb_001541_020 Hb_022408_010 Hb_022408_010 Hb_000032_320--Hb_022408_010 Hb_006586_050 Hb_006586_050 Hb_000032_320--Hb_006586_050 Hb_002027_260 Hb_002027_260 Hb_001728_100--Hb_002027_260 Hb_000107_500 Hb_000107_500 Hb_001728_100--Hb_000107_500 Hb_001728_100--Hb_004204_080 Hb_001728_100--Hb_000077_070 Hb_000803_190 Hb_000803_190 Hb_000953_010--Hb_000803_190 Hb_004734_060 Hb_004734_060 Hb_000953_010--Hb_004734_060 Hb_000836_360 Hb_000836_360 Hb_000953_010--Hb_000836_360 Hb_000173_400 Hb_000173_400 Hb_000953_010--Hb_000173_400 Hb_033152_080 Hb_033152_080 Hb_000953_010--Hb_033152_080 Hb_001936_020 Hb_001936_020 Hb_000059_210--Hb_001936_020 Hb_000059_210--Hb_006586_050 Hb_000291_190 Hb_000291_190 Hb_000059_210--Hb_000291_190 Hb_000059_210--Hb_033152_080 Hb_000059_210--Hb_004734_060 Hb_001797_050 Hb_001797_050 Hb_004204_080--Hb_001797_050 Hb_005730_030 Hb_005730_030 Hb_004204_080--Hb_005730_030 Hb_005532_050 Hb_005532_050 Hb_004204_080--Hb_005532_050 Hb_000031_050 Hb_000031_050 Hb_004204_080--Hb_000031_050 Hb_004204_080--Hb_022408_010 Hb_004204_080--Hb_001541_020 Hb_000077_230 Hb_000077_230 Hb_000077_070--Hb_000077_230 Hb_000025_360 Hb_000025_360 Hb_000077_070--Hb_000025_360 Hb_000336_140 Hb_000336_140 Hb_000077_070--Hb_000336_140 Hb_000077_070--Hb_000032_320 Hb_001247_070 Hb_001247_070 Hb_000077_070--Hb_001247_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
101.705 85.4353 24.1202 31.7473 105.291 96.9905
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
74.5773 47.0948 87.7002 35.6815 14.7316

CAGE analysis