Hb_156850_080

Information

Type -
Description -
Location Contig156850: 48087-52669
Sequence    

Annotation

kegg
ID tcc:TCM_034366
description Uncharacterized protein isoform 1
nr
ID XP_012073673.1
description PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08117 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13650: 47601-52812 , PASA_asmbl_13652: 50366-50751
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156850_080 0.0 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
2 Hb_020400_040 0.1768311557 - - PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Jatropha curcas]
3 Hb_002205_010 0.2027621267 - - hypothetical protein JCGZ_03337 [Jatropha curcas]
4 Hb_005496_070 0.216291886 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
5 Hb_002110_240 0.2181459771 - - clathrin assembly protein, putative [Ricinus communis]
6 Hb_001472_130 0.2194620371 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
7 Hb_000152_860 0.2278295092 - - receptor protein kinase, putative [Ricinus communis]
8 Hb_000072_330 0.2321453027 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000975_330 0.2404213948 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
10 Hb_005276_170 0.2424177485 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
11 Hb_128524_020 0.2426139085 - - PREDICTED: aspartic proteinase-like protein 2 isoform X2 [Jatropha curcas]
12 Hb_000215_350 0.243771432 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
13 Hb_001123_200 0.2449027076 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000139_100 0.245328292 - - PREDICTED: sugar transport protein 13-like [Jatropha curcas]
15 Hb_031295_010 0.2469124638 - - hypothetical protein JCGZ_19530 [Jatropha curcas]
16 Hb_000364_040 0.2494207045 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
17 Hb_000009_310 0.2503008945 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_004787_100 0.2539791959 - - PREDICTED: transcription factor bHLH47 [Jatropha curcas]
19 Hb_002876_070 0.2545193976 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
20 Hb_005545_070 0.2562282178 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]

Gene co-expression network

sample Hb_156850_080 Hb_156850_080 Hb_020400_040 Hb_020400_040 Hb_156850_080--Hb_020400_040 Hb_002205_010 Hb_002205_010 Hb_156850_080--Hb_002205_010 Hb_005496_070 Hb_005496_070 Hb_156850_080--Hb_005496_070 Hb_002110_240 Hb_002110_240 Hb_156850_080--Hb_002110_240 Hb_001472_130 Hb_001472_130 Hb_156850_080--Hb_001472_130 Hb_000152_860 Hb_000152_860 Hb_156850_080--Hb_000152_860 Hb_020400_040--Hb_002205_010 Hb_006096_010 Hb_006096_010 Hb_020400_040--Hb_006096_010 Hb_012760_010 Hb_012760_010 Hb_020400_040--Hb_012760_010 Hb_020400_040--Hb_002110_240 Hb_001123_200 Hb_001123_200 Hb_020400_040--Hb_001123_200 Hb_002205_010--Hb_002110_240 Hb_000179_240 Hb_000179_240 Hb_002205_010--Hb_000179_240 Hb_000256_130 Hb_000256_130 Hb_002205_010--Hb_000256_130 Hb_002205_010--Hb_001472_130 Hb_002205_010--Hb_001123_200 Hb_005976_040 Hb_005976_040 Hb_005496_070--Hb_005976_040 Hb_006043_020 Hb_006043_020 Hb_005496_070--Hb_006043_020 Hb_000139_100 Hb_000139_100 Hb_005496_070--Hb_000139_100 Hb_000345_500 Hb_000345_500 Hb_005496_070--Hb_000345_500 Hb_018563_020 Hb_018563_020 Hb_005496_070--Hb_018563_020 Hb_002053_030 Hb_002053_030 Hb_005496_070--Hb_002053_030 Hb_008173_030 Hb_008173_030 Hb_002110_240--Hb_008173_030 Hb_002110_240--Hb_000256_130 Hb_000343_180 Hb_000343_180 Hb_002110_240--Hb_000343_180 Hb_009233_030 Hb_009233_030 Hb_002110_240--Hb_009233_030 Hb_000809_080 Hb_000809_080 Hb_001472_130--Hb_000809_080 Hb_000038_040 Hb_000038_040 Hb_001472_130--Hb_000038_040 Hb_000805_230 Hb_000805_230 Hb_001472_130--Hb_000805_230 Hb_006935_010 Hb_006935_010 Hb_001472_130--Hb_006935_010 Hb_000221_060 Hb_000221_060 Hb_001472_130--Hb_000221_060 Hb_000417_420 Hb_000417_420 Hb_001472_130--Hb_000417_420 Hb_000152_860--Hb_000139_100 Hb_000152_860--Hb_001472_130 Hb_031295_010 Hb_031295_010 Hb_000152_860--Hb_031295_010 Hb_000152_860--Hb_000417_420 Hb_000152_860--Hb_000809_080 Hb_000152_860--Hb_005496_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.69849 169.372 46.8997 13.8496 2.72351 5.1119
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.6864 67.341 16.9637 5.00446 8.19647

CAGE analysis