Hb_157029_010

Information

Type -
Description -
Location Contig157029: 1484-5670
Sequence    

Annotation

kegg
ID cam:101497268
description uncharacterized LOC101497268
nr
ID XP_004514013.1
description PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_157029_010 0.0 - - PREDICTED: uncharacterized protein LOC101497268 [Cicer arietinum]
2 Hb_002888_080 0.2176440066 - - PREDICTED: uncharacterized protein LOC104120414 [Nicotiana tomentosiformis]
3 Hb_004228_040 0.2234760819 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
4 Hb_108557_010 0.2518836079 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
5 Hb_175841_010 0.2532102235 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
6 Hb_000130_070 0.2813977081 - - hypothetical protein JCGZ_14738 [Jatropha curcas]
7 Hb_001652_040 0.3030826271 - - PREDICTED: uncharacterized protein LOC103341683 [Prunus mume]
8 Hb_011798_030 0.3039074496 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Vitis vinifera]
9 Hb_000072_040 0.3132287625 - - -
10 Hb_005137_030 0.3173253864 - - conserved hypothetical protein [Ricinus communis]
11 Hb_070758_010 0.3194472989 - - -
12 Hb_000454_150 0.3226141834 transcription factor TF Family: C3H tRNA-dihydrouridine synthase, putative [Ricinus communis]
13 Hb_033286_020 0.3234350666 - - -
14 Hb_001631_100 0.3247310217 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_000703_180 0.3248597501 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]
16 Hb_007472_020 0.3334940781 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
17 Hb_001476_090 0.3377924752 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 3 [Jatropha curcas]
18 Hb_001087_010 0.3444429479 - - PREDICTED: uncharacterized protein LOC105630042 [Jatropha curcas]
19 Hb_100332_020 0.3452786674 - - PREDICTED: uncharacterized protein LOC105168695 [Sesamum indicum]
20 Hb_003020_300 0.3457450202 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_157029_010 Hb_157029_010 Hb_002888_080 Hb_002888_080 Hb_157029_010--Hb_002888_080 Hb_004228_040 Hb_004228_040 Hb_157029_010--Hb_004228_040 Hb_108557_010 Hb_108557_010 Hb_157029_010--Hb_108557_010 Hb_175841_010 Hb_175841_010 Hb_157029_010--Hb_175841_010 Hb_000130_070 Hb_000130_070 Hb_157029_010--Hb_000130_070 Hb_001652_040 Hb_001652_040 Hb_157029_010--Hb_001652_040 Hb_002888_080--Hb_108557_010 Hb_002888_080--Hb_004228_040 Hb_100332_020 Hb_100332_020 Hb_002888_080--Hb_100332_020 Hb_000832_010 Hb_000832_010 Hb_002888_080--Hb_000832_010 Hb_001871_030 Hb_001871_030 Hb_002888_080--Hb_001871_030 Hb_004228_040--Hb_001652_040 Hb_004228_040--Hb_108557_010 Hb_001225_060 Hb_001225_060 Hb_004228_040--Hb_001225_060 Hb_033286_020 Hb_033286_020 Hb_004228_040--Hb_033286_020 Hb_002090_010 Hb_002090_010 Hb_108557_010--Hb_002090_010 Hb_031474_020 Hb_031474_020 Hb_108557_010--Hb_031474_020 Hb_064106_010 Hb_064106_010 Hb_108557_010--Hb_064106_010 Hb_001087_010 Hb_001087_010 Hb_175841_010--Hb_001087_010 Hb_000668_110 Hb_000668_110 Hb_175841_010--Hb_000668_110 Hb_001631_100 Hb_001631_100 Hb_175841_010--Hb_001631_100 Hb_001496_120 Hb_001496_120 Hb_175841_010--Hb_001496_120 Hb_000800_110 Hb_000800_110 Hb_175841_010--Hb_000800_110 Hb_000454_150 Hb_000454_150 Hb_175841_010--Hb_000454_150 Hb_000823_010 Hb_000823_010 Hb_000130_070--Hb_000823_010 Hb_000505_100 Hb_000505_100 Hb_000130_070--Hb_000505_100 Hb_004064_060 Hb_004064_060 Hb_000130_070--Hb_004064_060 Hb_002025_270 Hb_002025_270 Hb_000130_070--Hb_002025_270 Hb_000940_170 Hb_000940_170 Hb_000130_070--Hb_000940_170 Hb_000406_060 Hb_000406_060 Hb_000130_070--Hb_000406_060 Hb_099496_010 Hb_099496_010 Hb_001652_040--Hb_099496_010 Hb_010810_110 Hb_010810_110 Hb_001652_040--Hb_010810_110 Hb_002477_220 Hb_002477_220 Hb_001652_040--Hb_002477_220 Hb_001652_040--Hb_108557_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.102679 0.119476 0 0.0502353 0.164136
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.150757 0.173939

CAGE analysis