Hb_157122_010

Information

Type -
Description -
Location Contig157122: 3-557
Sequence    

Annotation

kegg
ID pop:POPTR_0004s06050g
description POPTRDRAFT_855146; hypothetical protein
nr
ID KDP21143.1
description hypothetical protein JCGZ_21614 [Jatropha curcas]
swissprot
ID Q8RWZ5
description G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1
trembl
ID A0A067JEE7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21614 PE=3 SV=1
Gene Ontology
ID GO:0004687
description g-type lectin s-receptor-like serine threonine-protein kinase sd2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_157122_010 0.0 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
2 Hb_003085_050 0.0091933504 - - Polygalacturonase non-catalytic subunit AroGP3 precursor, putative [Ricinus communis]
3 Hb_002553_080 0.0749629152 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096-like [Eucalyptus grandis]
4 Hb_002157_180 0.0924020247 - - separase, putative [Ricinus communis]
5 Hb_002766_040 0.0992393996 - - 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis]
6 Hb_014113_010 0.1234917085 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
7 Hb_007735_010 0.1255477096 - - Gibberellin 20 oxidase, putative [Ricinus communis]
8 Hb_001652_050 0.1260862305 - - -
9 Hb_012702_020 0.1388620424 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
10 Hb_002400_250 0.1438713419 - - amino acid binding protein, putative [Ricinus communis]
11 Hb_000462_020 0.144616415 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_002171_070 0.1500744952 desease resistance Gene Name: NB-ARC NBS-LRR resistance gene-like protein ARGH30 [Populus trichocarpa]
13 Hb_008111_020 0.1503351933 - - Receptor like protein 6, putative [Theobroma cacao]
14 Hb_000101_060 0.1506766936 - - -
15 Hb_183700_010 0.1534081784 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_003752_130 0.1599941305 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
17 Hb_004931_060 0.1617997442 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4 [Nelumbo nucifera]
18 Hb_001596_040 0.1619429702 - - PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Populus euphratica]
19 Hb_015912_010 0.1619963743 - - cytochrome P450, putative [Ricinus communis]
20 Hb_008020_010 0.1659136777 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like [Jatropha curcas]

Gene co-expression network

sample Hb_157122_010 Hb_157122_010 Hb_003085_050 Hb_003085_050 Hb_157122_010--Hb_003085_050 Hb_002553_080 Hb_002553_080 Hb_157122_010--Hb_002553_080 Hb_002157_180 Hb_002157_180 Hb_157122_010--Hb_002157_180 Hb_002766_040 Hb_002766_040 Hb_157122_010--Hb_002766_040 Hb_014113_010 Hb_014113_010 Hb_157122_010--Hb_014113_010 Hb_007735_010 Hb_007735_010 Hb_157122_010--Hb_007735_010 Hb_003085_050--Hb_002553_080 Hb_003085_050--Hb_002766_040 Hb_003085_050--Hb_002157_180 Hb_003085_050--Hb_007735_010 Hb_003085_050--Hb_014113_010 Hb_002553_080--Hb_002766_040 Hb_002553_080--Hb_007735_010 Hb_001168_080 Hb_001168_080 Hb_002553_080--Hb_001168_080 Hb_005550_070 Hb_005550_070 Hb_002553_080--Hb_005550_070 Hb_008111_020 Hb_008111_020 Hb_002157_180--Hb_008111_020 Hb_001652_050 Hb_001652_050 Hb_002157_180--Hb_001652_050 Hb_047923_010 Hb_047923_010 Hb_002157_180--Hb_047923_010 Hb_003752_130 Hb_003752_130 Hb_002157_180--Hb_003752_130 Hb_002766_040--Hb_007735_010 Hb_183700_010 Hb_183700_010 Hb_002766_040--Hb_183700_010 Hb_002766_040--Hb_014113_010 Hb_084495_010 Hb_084495_010 Hb_014113_010--Hb_084495_010 Hb_099198_010 Hb_099198_010 Hb_014113_010--Hb_099198_010 Hb_003121_020 Hb_003121_020 Hb_014113_010--Hb_003121_020 Hb_014113_010--Hb_183700_010 Hb_003581_240 Hb_003581_240 Hb_014113_010--Hb_003581_240 Hb_007735_010--Hb_183700_010 Hb_031862_240 Hb_031862_240 Hb_007735_010--Hb_031862_240 Hb_011628_030 Hb_011628_030 Hb_007735_010--Hb_011628_030 Hb_007735_010--Hb_014113_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.133294 0.0372957 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.220865 0

CAGE analysis