Hb_157846_010

Information

Type -
Description -
Location Contig157846: 206-505
Sequence    

Annotation

kegg
ID pop:POPTR_2263s002001
description hypothetical protein
nr
ID XP_012084625.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
swissprot
ID O81905
description Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1
trembl
ID A0A067K6D5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20198 PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rks1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13804: 344-454
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_157846_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
2 Hb_049160_010 0.1595920871 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
3 Hb_001396_150 0.1983827022 transcription factor TF Family: M-type hypothetical protein POPTR_0001s13660g [Populus trichocarpa]
4 Hb_000649_010 0.2173416833 - - PREDICTED: adagio protein 3 [Jatropha curcas]
5 Hb_004883_060 0.2173770922 - - PREDICTED: uncharacterized protein LOC105647345 isoform X1 [Jatropha curcas]
6 Hb_000217_060 0.2175913972 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_063480_020 0.2226797355 - - unnamed protein product [Vitis vinifera]
8 Hb_141918_010 0.2229132578 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
9 Hb_009848_040 0.2446177192 - - hypothetical protein B456_009G349600 [Gossypium raimondii]
10 Hb_134894_010 0.2475685559 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like isoform X2 [Gossypium raimondii]
11 Hb_010727_010 0.2487208746 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
12 Hb_141212_010 0.2509519985 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
13 Hb_001900_110 0.2544697747 - - PREDICTED: replication protein A 70 kDa DNA-binding subunit E [Jatropha curcas]
14 Hb_027445_050 0.2546993758 - - PREDICTED: titin isoform X13 [Jatropha curcas]
15 Hb_022400_010 0.2596202495 - - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein [Theobroma cacao]
16 Hb_081745_010 0.2596283363 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
17 Hb_139859_010 0.2605593181 - - PREDICTED: cell division control protein 48 homolog D-like [Nicotiana sylvestris]
18 Hb_000375_370 0.2612321728 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
19 Hb_001989_020 0.2621276413 - - hypothetical protein JCGZ_15521 [Jatropha curcas]
20 Hb_009848_030 0.2622313648 - - long-chain-fatty-acid CoA ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_157846_010 Hb_157846_010 Hb_049160_010 Hb_049160_010 Hb_157846_010--Hb_049160_010 Hb_001396_150 Hb_001396_150 Hb_157846_010--Hb_001396_150 Hb_000649_010 Hb_000649_010 Hb_157846_010--Hb_000649_010 Hb_004883_060 Hb_004883_060 Hb_157846_010--Hb_004883_060 Hb_000217_060 Hb_000217_060 Hb_157846_010--Hb_000217_060 Hb_063480_020 Hb_063480_020 Hb_157846_010--Hb_063480_020 Hb_049160_010--Hb_063480_020 Hb_000497_010 Hb_000497_010 Hb_049160_010--Hb_000497_010 Hb_141918_010 Hb_141918_010 Hb_049160_010--Hb_141918_010 Hb_001907_100 Hb_001907_100 Hb_049160_010--Hb_001907_100 Hb_010727_010 Hb_010727_010 Hb_049160_010--Hb_010727_010 Hb_002235_140 Hb_002235_140 Hb_001396_150--Hb_002235_140 Hb_001396_150--Hb_000217_060 Hb_000375_370 Hb_000375_370 Hb_001396_150--Hb_000375_370 Hb_001396_150--Hb_049160_010 Hb_114261_010 Hb_114261_010 Hb_001396_150--Hb_114261_010 Hb_001989_020 Hb_001989_020 Hb_000649_010--Hb_001989_020 Hb_001301_230 Hb_001301_230 Hb_000649_010--Hb_001301_230 Hb_000808_070 Hb_000808_070 Hb_000649_010--Hb_000808_070 Hb_000932_070 Hb_000932_070 Hb_000649_010--Hb_000932_070 Hb_003157_010 Hb_003157_010 Hb_000649_010--Hb_003157_010 Hb_004032_180 Hb_004032_180 Hb_000649_010--Hb_004032_180 Hb_005410_040 Hb_005410_040 Hb_004883_060--Hb_005410_040 Hb_003073_210 Hb_003073_210 Hb_004883_060--Hb_003073_210 Hb_171789_010 Hb_171789_010 Hb_004883_060--Hb_171789_010 Hb_139859_010 Hb_139859_010 Hb_004883_060--Hb_139859_010 Hb_000861_030 Hb_000861_030 Hb_004883_060--Hb_000861_030 Hb_000139_240 Hb_000139_240 Hb_004883_060--Hb_000139_240 Hb_000217_060--Hb_049160_010 Hb_084858_010 Hb_084858_010 Hb_000217_060--Hb_084858_010 Hb_007846_040 Hb_007846_040 Hb_000217_060--Hb_007846_040 Hb_134894_010 Hb_134894_010 Hb_000217_060--Hb_134894_010 Hb_054885_020 Hb_054885_020 Hb_063480_020--Hb_054885_020 Hb_000406_110 Hb_000406_110 Hb_063480_020--Hb_000406_110 Hb_000537_140 Hb_000537_140 Hb_063480_020--Hb_000537_140 Hb_006588_150 Hb_006588_150 Hb_063480_020--Hb_006588_150 Hb_002837_110 Hb_002837_110 Hb_063480_020--Hb_002837_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.55102 23.8243 3.36969 1.95404 1.55479 35.6249
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.74293 3.83279 4.61182 17.9266 0.910465

CAGE analysis