Hb_157957_010

Information

Type -
Description -
Location Contig157957: 1-483
Sequence    

Annotation

kegg
ID pmum:103341656
description probable receptor-like protein kinase At5g39020
nr
ID KDP35188.1
description hypothetical protein JCGZ_10722 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067KJM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10722 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_157957_010 0.0 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
2 Hb_034581_010 0.0677784128 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
3 Hb_036754_040 0.07019797 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_110356_010 0.0728221804 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
5 Hb_000359_230 0.0766843664 - - PREDICTED: putative DNA-binding protein ESCAROLA [Prunus mume]
6 Hb_002548_030 0.0774407419 - - PREDICTED: uncharacterized protein LOC103343650 [Prunus mume]
7 Hb_064692_010 0.0808393505 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_125201_010 0.082569496 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
9 Hb_047955_010 0.0853881951 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
10 Hb_002252_030 0.0871425275 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
11 Hb_041534_010 0.0881952991 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
12 Hb_010136_020 0.0889437741 - - stress-induced receptor-like kinase [Medicago truncatula]
13 Hb_000338_020 0.0893968775 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
14 Hb_002006_110 0.0904347386 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
15 Hb_001677_140 0.0927339007 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
16 Hb_027506_060 0.1009963583 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
17 Hb_006648_030 0.1037879942 - - Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus communis]
18 Hb_000032_150 0.107247252 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
19 Hb_019978_010 0.1087922167 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
20 Hb_005248_020 0.1105669641 - - hypothetical protein JCGZ_23770 [Jatropha curcas]

Gene co-expression network

sample Hb_157957_010 Hb_157957_010 Hb_034581_010 Hb_034581_010 Hb_157957_010--Hb_034581_010 Hb_036754_040 Hb_036754_040 Hb_157957_010--Hb_036754_040 Hb_110356_010 Hb_110356_010 Hb_157957_010--Hb_110356_010 Hb_000359_230 Hb_000359_230 Hb_157957_010--Hb_000359_230 Hb_002548_030 Hb_002548_030 Hb_157957_010--Hb_002548_030 Hb_064692_010 Hb_064692_010 Hb_157957_010--Hb_064692_010 Hb_034581_010--Hb_110356_010 Hb_034581_010--Hb_002548_030 Hb_034581_010--Hb_000359_230 Hb_001677_140 Hb_001677_140 Hb_034581_010--Hb_001677_140 Hb_034581_010--Hb_036754_040 Hb_010136_020 Hb_010136_020 Hb_034581_010--Hb_010136_020 Hb_036754_040--Hb_010136_020 Hb_002006_110 Hb_002006_110 Hb_036754_040--Hb_002006_110 Hb_036754_040--Hb_001677_140 Hb_019978_010 Hb_019978_010 Hb_036754_040--Hb_019978_010 Hb_036754_040--Hb_110356_010 Hb_110356_010--Hb_002548_030 Hb_110356_010--Hb_000359_230 Hb_110356_010--Hb_001677_140 Hb_099188_010 Hb_099188_010 Hb_110356_010--Hb_099188_010 Hb_128851_020 Hb_128851_020 Hb_110356_010--Hb_128851_020 Hb_000359_230--Hb_002548_030 Hb_000359_230--Hb_099188_010 Hb_000359_230--Hb_001677_140 Hb_000359_230--Hb_128851_020 Hb_002548_030--Hb_099188_010 Hb_002548_030--Hb_001677_140 Hb_002548_030--Hb_128851_020 Hb_041534_010 Hb_041534_010 Hb_064692_010--Hb_041534_010 Hb_000338_020 Hb_000338_020 Hb_064692_010--Hb_000338_020 Hb_013591_010 Hb_013591_010 Hb_064692_010--Hb_013591_010 Hb_137612_010 Hb_137612_010 Hb_064692_010--Hb_137612_010 Hb_002422_020 Hb_002422_020 Hb_064692_010--Hb_002422_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 39.9918 12.6394 10.0172 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.139735 0

CAGE analysis