Hb_158845_060

Information

Type -
Description -
Location Contig158845: 56446-66961
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001658mg
description hypothetical protein
nr
ID XP_012067453.1
description PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
swissprot
ID Q8L831
description Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 PE=1 SV=1
trembl
ID A0A067LCV4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26952 PE=4 SV=1
Gene Ontology
ID GO:0016787
description nudix hydrolase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14104: 56523-66964
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_158845_060 0.0 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
2 Hb_003964_110 0.0637228286 - - PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Jatropha curcas]
3 Hb_000599_360 0.0674229947 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
4 Hb_000297_030 0.0700283453 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
5 Hb_080147_050 0.0739148172 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
6 Hb_001085_080 0.0771705814 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
7 Hb_021977_010 0.0774424478 - - PREDICTED: leukotriene A-4 hydrolase homolog [Jatropha curcas]
8 Hb_001558_040 0.0824552847 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
9 Hb_005298_020 0.0830912787 - - PREDICTED: anaphase-promoting complex subunit 2 [Jatropha curcas]
10 Hb_024758_020 0.0834087341 - - acyl-CoA binding protein 3B [Vernicia fordii]
11 Hb_000205_280 0.0871589527 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
12 Hb_002007_260 0.0887422991 - - beta-mannosidase, putative [Ricinus communis]
13 Hb_009615_160 0.0890933651 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
14 Hb_135959_010 0.0909928783 - - hypothetical protein JCGZ_07060 [Jatropha curcas]
15 Hb_000665_260 0.0922896514 - - PREDICTED: uncharacterized protein LOC105637620 isoform X1 [Jatropha curcas]
16 Hb_002739_120 0.093153779 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]
17 Hb_000157_070 0.0933654856 - - PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]
18 Hb_001414_010 0.0945897592 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
19 Hb_027760_060 0.0949625048 - - PREDICTED: KH domain-containing protein At4g18375-like [Jatropha curcas]
20 Hb_001587_030 0.0953082852 - - hypothetical protein JCGZ_09892 [Jatropha curcas]

Gene co-expression network

sample Hb_158845_060 Hb_158845_060 Hb_003964_110 Hb_003964_110 Hb_158845_060--Hb_003964_110 Hb_000599_360 Hb_000599_360 Hb_158845_060--Hb_000599_360 Hb_000297_030 Hb_000297_030 Hb_158845_060--Hb_000297_030 Hb_080147_050 Hb_080147_050 Hb_158845_060--Hb_080147_050 Hb_001085_080 Hb_001085_080 Hb_158845_060--Hb_001085_080 Hb_021977_010 Hb_021977_010 Hb_158845_060--Hb_021977_010 Hb_008165_020 Hb_008165_020 Hb_003964_110--Hb_008165_020 Hb_000227_320 Hb_000227_320 Hb_003964_110--Hb_000227_320 Hb_000331_100 Hb_000331_100 Hb_003964_110--Hb_000331_100 Hb_001414_010 Hb_001414_010 Hb_003964_110--Hb_001414_010 Hb_000665_260 Hb_000665_260 Hb_003964_110--Hb_000665_260 Hb_000599_360--Hb_021977_010 Hb_000599_360--Hb_003964_110 Hb_160608_010 Hb_160608_010 Hb_000599_360--Hb_160608_010 Hb_005741_040 Hb_005741_040 Hb_000599_360--Hb_005741_040 Hb_000599_360--Hb_080147_050 Hb_006468_010 Hb_006468_010 Hb_000297_030--Hb_006468_010 Hb_016461_020 Hb_016461_020 Hb_000297_030--Hb_016461_020 Hb_000890_160 Hb_000890_160 Hb_000297_030--Hb_000890_160 Hb_000046_600 Hb_000046_600 Hb_000297_030--Hb_000046_600 Hb_024758_020 Hb_024758_020 Hb_000297_030--Hb_024758_020 Hb_020805_180 Hb_020805_180 Hb_080147_050--Hb_020805_180 Hb_000321_090 Hb_000321_090 Hb_080147_050--Hb_000321_090 Hb_000834_230 Hb_000834_230 Hb_080147_050--Hb_000834_230 Hb_000787_200 Hb_000787_200 Hb_080147_050--Hb_000787_200 Hb_007245_020 Hb_007245_020 Hb_080147_050--Hb_007245_020 Hb_001097_040 Hb_001097_040 Hb_001085_080--Hb_001097_040 Hb_000579_130 Hb_000579_130 Hb_001085_080--Hb_000579_130 Hb_001558_040 Hb_001558_040 Hb_001085_080--Hb_001558_040 Hb_002739_120 Hb_002739_120 Hb_001085_080--Hb_002739_120 Hb_001811_170 Hb_001811_170 Hb_001085_080--Hb_001811_170 Hb_021977_010--Hb_001414_010 Hb_003661_010 Hb_003661_010 Hb_021977_010--Hb_003661_010 Hb_009476_120 Hb_009476_120 Hb_021977_010--Hb_009476_120 Hb_001998_220 Hb_001998_220 Hb_021977_010--Hb_001998_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.11772 16.5457 16.516 20.2043 8.41948 7.0245
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.34704 3.48696 4.55363 20.7848 13.5124

CAGE analysis