Hb_158926_010

Information

Type -
Description -
Location Contig158926: 201-1139
Sequence    

Annotation

kegg
ID cic:CICLE_v10010865mg
description hypothetical protein
nr
ID XP_012091087.1
description PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JD56
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03541 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14108: 307-775
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_158926_010 0.0 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
2 Hb_101058_020 0.0738051761 - - DWNN domain isoform 2 [Theobroma cacao]
3 Hb_001894_060 0.1077940565 - - PREDICTED: uncharacterized protein LOC105644596 [Jatropha curcas]
4 Hb_000808_090 0.1105281567 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
5 Hb_022137_020 0.1107182419 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
6 Hb_004079_040 0.1119950336 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
7 Hb_000665_090 0.1227599787 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000731_020 0.1243287024 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
9 Hb_000221_280 0.1253821112 - - PREDICTED: protein EXORDIUM-like [Populus euphratica]
10 Hb_007894_020 0.1260429929 - - protein translation factor SUI1 homolog 2 [Jatropha curcas]
11 Hb_004724_310 0.1273967732 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
12 Hb_029622_080 0.1290744177 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
13 Hb_010142_040 0.1339593137 - - PREDICTED: classical arabinogalactan protein 4-like [Jatropha curcas]
14 Hb_000827_090 0.1360731014 - - PREDICTED: uncharacterized protein LOC103714121 [Phoenix dactylifera]
15 Hb_032920_040 0.1383831411 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s30260g [Populus trichocarpa]
16 Hb_008963_010 0.1412549019 desease resistance Gene Name: LRR_4 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
17 Hb_096930_010 0.1449653044 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
18 Hb_032260_100 0.1454979495 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
19 Hb_002542_030 0.1460567445 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
20 Hb_000925_110 0.1469673622 - - Spotted leaf protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_158926_010 Hb_158926_010 Hb_101058_020 Hb_101058_020 Hb_158926_010--Hb_101058_020 Hb_001894_060 Hb_001894_060 Hb_158926_010--Hb_001894_060 Hb_000808_090 Hb_000808_090 Hb_158926_010--Hb_000808_090 Hb_022137_020 Hb_022137_020 Hb_158926_010--Hb_022137_020 Hb_004079_040 Hb_004079_040 Hb_158926_010--Hb_004079_040 Hb_000665_090 Hb_000665_090 Hb_158926_010--Hb_000665_090 Hb_007894_020 Hb_007894_020 Hb_101058_020--Hb_007894_020 Hb_101058_020--Hb_022137_020 Hb_101058_020--Hb_000665_090 Hb_101058_020--Hb_001894_060 Hb_101058_020--Hb_004079_040 Hb_007441_150 Hb_007441_150 Hb_001894_060--Hb_007441_150 Hb_001894_060--Hb_000808_090 Hb_029622_080 Hb_029622_080 Hb_001894_060--Hb_029622_080 Hb_032260_100 Hb_032260_100 Hb_001894_060--Hb_032260_100 Hb_000808_090--Hb_029622_080 Hb_000808_090--Hb_000665_090 Hb_000808_090--Hb_032260_100 Hb_000656_350 Hb_000656_350 Hb_000808_090--Hb_000656_350 Hb_000627_130 Hb_000627_130 Hb_000808_090--Hb_000627_130 Hb_124953_010 Hb_124953_010 Hb_000808_090--Hb_124953_010 Hb_022137_020--Hb_007894_020 Hb_002542_030 Hb_002542_030 Hb_022137_020--Hb_002542_030 Hb_124677_020 Hb_124677_020 Hb_022137_020--Hb_124677_020 Hb_001999_170 Hb_001999_170 Hb_022137_020--Hb_001999_170 Hb_000358_170 Hb_000358_170 Hb_004079_040--Hb_000358_170 Hb_004079_040--Hb_001894_060 Hb_000127_200 Hb_000127_200 Hb_004079_040--Hb_000127_200 Hb_004079_040--Hb_000665_090 Hb_002066_050 Hb_002066_050 Hb_000665_090--Hb_002066_050 Hb_000714_080 Hb_000714_080 Hb_000665_090--Hb_000714_080 Hb_000925_110 Hb_000925_110 Hb_000665_090--Hb_000925_110 Hb_000904_110 Hb_000904_110 Hb_000665_090--Hb_000904_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0538612 32.4341 16.5753 15.8529 0.331277 0.123224
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.493584 0.948879 0.474267 0.764401 0.614733

CAGE analysis