Hb_159012_010

Information

Type -
Description -
Location Contig159012: 10-357
Sequence    

Annotation

kegg
ID rcu:RCOM_0091750
description Receptor protein kinase CLAVATA1 precursor, putative (EC:1.3.1.74)
nr
ID XP_012073020.1
description PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
swissprot
ID Q9FL51
description Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1
trembl
ID A0A067KM89
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06810 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probably inactive leucine-rich repeat receptor-like protein kinase at5g06940

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159012_010 0.0 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
2 Hb_000194_030 0.0570757481 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
3 Hb_004926_010 0.0681952087 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
4 Hb_000480_050 0.0812644112 - - hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris]
5 Hb_004319_100 0.1050749521 - - PREDICTED: gibberellin-regulated protein 14 isoform X3 [Jatropha curcas]
6 Hb_001529_010 0.110833017 - - -
7 Hb_007477_020 0.1187044681 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
8 Hb_039946_040 0.1245730614 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
9 Hb_002999_010 0.1247101718 - - PREDICTED: extracellular ribonuclease LE-like [Vitis vinifera]
10 Hb_007426_100 0.1250372724 - - conserved hypothetical protein [Ricinus communis]
11 Hb_060236_010 0.125419535 - - hypothetical protein JCGZ_26099 [Jatropha curcas]
12 Hb_004031_060 0.1304557343 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]
13 Hb_033153_030 0.1327181865 - - PREDICTED: uncharacterized protein LOC105650145 [Jatropha curcas]
14 Hb_082733_010 0.1363333369 - - hypothetical protein JCGZ_23600 [Jatropha curcas]
15 Hb_005348_020 0.1421061551 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001091_010 0.1429456767 - - PREDICTED: putative disease resistance protein RGA4 isoform X2 [Malus domestica]
17 Hb_003058_090 0.1436267561 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
18 Hb_059226_020 0.1455743958 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
19 Hb_000740_140 0.1458030203 transcription factor TF Family: OFP PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]
20 Hb_016120_030 0.1502826464 - - hypothetical protein EUGRSUZ_D00080 [Eucalyptus grandis]

Gene co-expression network

sample Hb_159012_010 Hb_159012_010 Hb_000194_030 Hb_000194_030 Hb_159012_010--Hb_000194_030 Hb_004926_010 Hb_004926_010 Hb_159012_010--Hb_004926_010 Hb_000480_050 Hb_000480_050 Hb_159012_010--Hb_000480_050 Hb_004319_100 Hb_004319_100 Hb_159012_010--Hb_004319_100 Hb_001529_010 Hb_001529_010 Hb_159012_010--Hb_001529_010 Hb_007477_020 Hb_007477_020 Hb_159012_010--Hb_007477_020 Hb_000194_030--Hb_004926_010 Hb_000194_030--Hb_004319_100 Hb_007426_100 Hb_007426_100 Hb_000194_030--Hb_007426_100 Hb_000194_030--Hb_001529_010 Hb_000194_030--Hb_000480_050 Hb_004926_010--Hb_000480_050 Hb_004031_060 Hb_004031_060 Hb_004926_010--Hb_004031_060 Hb_002999_010 Hb_002999_010 Hb_004926_010--Hb_002999_010 Hb_004926_010--Hb_007426_100 Hb_000480_050--Hb_002999_010 Hb_000480_050--Hb_007477_020 Hb_000480_050--Hb_004031_060 Hb_033772_040 Hb_033772_040 Hb_004319_100--Hb_033772_040 Hb_004319_100--Hb_007426_100 Hb_004319_100--Hb_001529_010 Hb_034310_020 Hb_034310_020 Hb_004319_100--Hb_034310_020 Hb_033153_030 Hb_033153_030 Hb_001529_010--Hb_033153_030 Hb_000445_480 Hb_000445_480 Hb_001529_010--Hb_000445_480 Hb_001529_010--Hb_007426_100 Hb_002894_020 Hb_002894_020 Hb_001529_010--Hb_002894_020 Hb_003058_090 Hb_003058_090 Hb_007477_020--Hb_003058_090 Hb_007477_020--Hb_033153_030 Hb_007477_020--Hb_002999_010 Hb_002874_100 Hb_002874_100 Hb_007477_020--Hb_002874_100 Hb_005373_030 Hb_005373_030 Hb_007477_020--Hb_005373_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.463504 0.47637 10.487 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.5713 0

CAGE analysis