Hb_159191_010

Information

Type -
Description -
Location Contig159191: 1982-2637
Sequence    

Annotation

kegg
ID aly:ARALYDRAFT_482903
description hypothetical protein
nr
ID ABZ88804.1
description protease inhibitor protein [Hevea brasiliensis]
swissprot
ID Q6XNP7
description Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2
trembl
ID B3FNP9
description Protease inhibitor protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005576
description protease inhibitor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14130: 1940-2494
cDNA
(Sanger)
(ID:Location)		 002_A07.ab1: 1972-2237 , 002_L01.ab1: 1940-2489 , 004_G11.ab1: 2014-2492 , 010_P01.ab1: 2020-2485 , 011_F12.ab1: 1945-2490 , 018_E07.ab1: 2014-2489 , 018_I10.ab1: 1944-2492 , 019_A18.ab1: 1944-2487 , 020_A19.ab1: 2015-2489 , 026_G11.ab1: 1940-2321 , 033_O06.ab1: 2014-2492 , 035_J15.ab1: 1941-2487 , 036_F07.ab1: 1944-2492 , 036_I06.ab1: 2020-2492 , 038_H22.ab1: 2020-2487 , 044_K08.ab1: 1944-2494 , 047_N01.ab1: 2020-2487 , 048_I17.ab1: 2020-2489 , 050_B05.ab1: 2014-2489 , 050_E09.ab1: 2020-2487 , 052_J08.ab1: 1941-2487 , 052_L04.ab1: 1941-2487 , 052_M08.ab1: 2014-2489 , 053_I20.ab1: 2015-2489

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159191_010 0.0 - - protease inhibitor protein [Hevea brasiliensis]
2 Hb_003050_070 0.1570230484 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000567_280 0.1588251799 - - PREDICTED: uncharacterized protein At4g06598-like [Populus euphratica]
4 Hb_007809_090 0.1636453266 - - protease inhibitor protein [Hevea brasiliensis]
5 Hb_001671_060 0.1738543765 - - fad NAD binding oxidoreductases, putative [Ricinus communis]
6 Hb_001507_070 0.186672603 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000714_010 0.1873017454 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
8 Hb_000575_020 0.1885767494 - - PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Jatropha curcas]
9 Hb_004108_090 0.1889666755 - - PREDICTED: uncharacterized protein LOC105650231 [Jatropha curcas]
10 Hb_003211_050 0.1921463196 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
11 Hb_000803_050 0.1931803038 - - PREDICTED: uncharacterized protein LOC105648296 [Jatropha curcas]
12 Hb_001035_040 0.1956005484 - - unnamed protein product [Coffea canephora]
13 Hb_089100_030 0.1982673485 - - -
14 Hb_000235_010 0.202512671 - - PREDICTED: serine carboxypeptidase-like 18 [Jatropha curcas]
15 Hb_011004_010 0.2032244149 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
16 Hb_104010_010 0.2050898156 - - hypothetical protein JCGZ_26423 [Jatropha curcas]
17 Hb_008864_060 0.2053124624 - - PREDICTED: uncharacterized protein LOC105634361 [Jatropha curcas]
18 Hb_003020_310 0.2068219085 - - glycosyltransferase, putative [Ricinus communis]
19 Hb_000453_300 0.2119589874 - - latex cystatin [Hevea brasiliensis]
20 Hb_000175_610 0.2124695362 transcription factor TF Family: Tify PREDICTED: protein TIFY 8 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_159191_010 Hb_159191_010 Hb_003050_070 Hb_003050_070 Hb_159191_010--Hb_003050_070 Hb_000567_280 Hb_000567_280 Hb_159191_010--Hb_000567_280 Hb_007809_090 Hb_007809_090 Hb_159191_010--Hb_007809_090 Hb_001671_060 Hb_001671_060 Hb_159191_010--Hb_001671_060 Hb_001507_070 Hb_001507_070 Hb_159191_010--Hb_001507_070 Hb_000714_010 Hb_000714_010 Hb_159191_010--Hb_000714_010 Hb_003050_070--Hb_000714_010 Hb_003211_050 Hb_003211_050 Hb_003050_070--Hb_003211_050 Hb_003050_070--Hb_000567_280 Hb_104010_010 Hb_104010_010 Hb_003050_070--Hb_104010_010 Hb_010166_020 Hb_010166_020 Hb_003050_070--Hb_010166_020 Hb_149683_010 Hb_149683_010 Hb_003050_070--Hb_149683_010 Hb_000567_280--Hb_104010_010 Hb_000091_100 Hb_000091_100 Hb_000567_280--Hb_000091_100 Hb_001741_090 Hb_001741_090 Hb_000567_280--Hb_001741_090 Hb_002835_220 Hb_002835_220 Hb_000567_280--Hb_002835_220 Hb_000559_080 Hb_000559_080 Hb_007809_090--Hb_000559_080 Hb_007120_070 Hb_007120_070 Hb_007809_090--Hb_007120_070 Hb_003020_310 Hb_003020_310 Hb_007809_090--Hb_003020_310 Hb_007416_220 Hb_007416_220 Hb_007809_090--Hb_007416_220 Hb_001799_040 Hb_001799_040 Hb_007809_090--Hb_001799_040 Hb_000250_010 Hb_000250_010 Hb_001671_060--Hb_000250_010 Hb_000107_070 Hb_000107_070 Hb_001671_060--Hb_000107_070 Hb_001671_060--Hb_007120_070 Hb_000803_050 Hb_000803_050 Hb_001671_060--Hb_000803_050 Hb_001157_220 Hb_001157_220 Hb_001671_060--Hb_001157_220 Hb_000178_110 Hb_000178_110 Hb_001671_060--Hb_000178_110 Hb_000742_270 Hb_000742_270 Hb_001507_070--Hb_000742_270 Hb_011004_010 Hb_011004_010 Hb_001507_070--Hb_011004_010 Hb_003371_100 Hb_003371_100 Hb_001507_070--Hb_003371_100 Hb_148121_010 Hb_148121_010 Hb_001507_070--Hb_148121_010 Hb_000215_180 Hb_000215_180 Hb_001507_070--Hb_000215_180 Hb_000032_040 Hb_000032_040 Hb_001507_070--Hb_000032_040 Hb_000714_010--Hb_000250_010 Hb_000714_010--Hb_003211_050 Hb_000714_010--Hb_010166_020 Hb_003777_230 Hb_003777_230 Hb_000714_010--Hb_003777_230 Hb_000714_010--Hb_149683_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3796.99 19.1135 333.935 1181.99 266.976 143.821
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11851 7939.68 3418.13 236.113 366.153

CAGE analysis