Hb_159809_030

Information

Type -
Description -
Location Contig159809: 46076-48051
Sequence    

Annotation

kegg
ID rcu:RCOM_0937550
description hypothetical protein
nr
ID XP_012069645.1
description PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2-like isoform X2 [Jatropha curcas]
swissprot
ID Q9ZSJ0
description UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2 OS=Arabidopsis thaliana GN=RGXT2 PE=1 SV=1
trembl
ID A0A067LCP4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10066 PE=4 SV=1
Gene Ontology
ID GO:0016740
description udp-d-xylose:l-fucose alpha- -d-xylosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14240: 46139-48242
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159809_030 0.0 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2-like isoform X2 [Jatropha curcas]
2 Hb_004102_170 0.0757310126 - - PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Jatropha curcas]
3 Hb_121089_030 0.0792485352 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
4 Hb_008511_020 0.0798763521 - - PREDICTED: coatomer subunit gamma-2 [Jatropha curcas]
5 Hb_000049_020 0.0837775086 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
6 Hb_001440_020 0.0865961823 - - exocyst componenet sec8, putative [Ricinus communis]
7 Hb_008014_040 0.0871031045 - - PREDICTED: uncharacterized protein LOC105649721 [Jatropha curcas]
8 Hb_001789_030 0.0873332383 - - PREDICTED: signal peptide peptidase-like 1 [Jatropha curcas]
9 Hb_003929_170 0.0882084683 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
10 Hb_000371_090 0.0882272732 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Jatropha curcas]
11 Hb_011310_110 0.0885170995 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
12 Hb_001002_060 0.0888586601 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
13 Hb_000390_250 0.0890155463 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
14 Hb_000146_040 0.0890243746 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
15 Hb_000503_020 0.0903108963 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
16 Hb_000320_290 0.0913552317 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
17 Hb_000163_090 0.0915800034 - - gamma-tubulin complex component, putative [Ricinus communis]
18 Hb_000139_530 0.0924009997 - - conserved hypothetical protein [Ricinus communis]
19 Hb_007800_020 0.0929076993 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
20 Hb_002675_030 0.0941261516 - - coatomer beta subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_159809_030 Hb_159809_030 Hb_004102_170 Hb_004102_170 Hb_159809_030--Hb_004102_170 Hb_121089_030 Hb_121089_030 Hb_159809_030--Hb_121089_030 Hb_008511_020 Hb_008511_020 Hb_159809_030--Hb_008511_020 Hb_000049_020 Hb_000049_020 Hb_159809_030--Hb_000049_020 Hb_001440_020 Hb_001440_020 Hb_159809_030--Hb_001440_020 Hb_008014_040 Hb_008014_040 Hb_159809_030--Hb_008014_040 Hb_000787_160 Hb_000787_160 Hb_004102_170--Hb_000787_160 Hb_004102_170--Hb_000049_020 Hb_000146_040 Hb_000146_040 Hb_004102_170--Hb_000146_040 Hb_000345_160 Hb_000345_160 Hb_004102_170--Hb_000345_160 Hb_001405_210 Hb_001405_210 Hb_004102_170--Hb_001405_210 Hb_005797_010 Hb_005797_010 Hb_004102_170--Hb_005797_010 Hb_000017_230 Hb_000017_230 Hb_121089_030--Hb_000017_230 Hb_030982_010 Hb_030982_010 Hb_121089_030--Hb_030982_010 Hb_021165_010 Hb_021165_010 Hb_121089_030--Hb_021165_010 Hb_000320_290 Hb_000320_290 Hb_121089_030--Hb_000320_290 Hb_001552_030 Hb_001552_030 Hb_121089_030--Hb_001552_030 Hb_010042_030 Hb_010042_030 Hb_121089_030--Hb_010042_030 Hb_002675_030 Hb_002675_030 Hb_008511_020--Hb_002675_030 Hb_008511_020--Hb_001440_020 Hb_002027_080 Hb_002027_080 Hb_008511_020--Hb_002027_080 Hb_001518_080 Hb_001518_080 Hb_008511_020--Hb_001518_080 Hb_008511_020--Hb_000049_020 Hb_008511_020--Hb_000345_160 Hb_000300_270 Hb_000300_270 Hb_000049_020--Hb_000300_270 Hb_000049_020--Hb_000345_160 Hb_000256_150 Hb_000256_150 Hb_000049_020--Hb_000256_150 Hb_002883_030 Hb_002883_030 Hb_000049_020--Hb_002883_030 Hb_000215_300 Hb_000215_300 Hb_000049_020--Hb_000215_300 Hb_012518_070 Hb_012518_070 Hb_001440_020--Hb_012518_070 Hb_012114_100 Hb_012114_100 Hb_001440_020--Hb_012114_100 Hb_003097_140 Hb_003097_140 Hb_001440_020--Hb_003097_140 Hb_001440_020--Hb_002675_030 Hb_001329_250 Hb_001329_250 Hb_001440_020--Hb_001329_250 Hb_010315_020 Hb_010315_020 Hb_008014_040--Hb_010315_020 Hb_000212_420 Hb_000212_420 Hb_008014_040--Hb_000212_420 Hb_008014_040--Hb_008511_020 Hb_000069_570 Hb_000069_570 Hb_008014_040--Hb_000069_570 Hb_022250_010 Hb_022250_010 Hb_008014_040--Hb_022250_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.0956 18.9423 26.0536 45.1195 18.6606 24.1888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.3873 11.0648 17.8105 18.2398 22.4575

CAGE analysis