Hb_159921_010

Information

Type -
Description -
Location Contig159921: 186-661
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159921_010 0.0 - - -
2 Hb_000853_400 0.2457593321 - - PREDICTED: CTP synthase [Jatropha curcas]
3 Hb_001008_040 0.2802810885 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
4 Hb_000432_060 0.2808222128 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_122408_010 0.2830803397 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_003327_040 0.288342248 - - PREDICTED: ABC transporter G family member 17-like [Jatropha curcas]
7 Hb_002666_020 0.2891809942 - - VAMP/SYNAPTOBREVIN-ASSOCIATED protein 27-1 [Populus trichocarpa]
8 Hb_002374_430 0.2896743363 - - conserved hypothetical protein [Ricinus communis]
9 Hb_096346_010 0.2911259447 - - unnamed protein product [Coffea canephora]
10 Hb_007441_050 0.29287094 - - unknown [Medicago truncatula]
11 Hb_000733_210 0.2948117256 - - putative serine/threonine protein phosphatase [Angiostrongylus costaricensis]
12 Hb_005914_150 0.3015751034 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Jatropha curcas]
13 Hb_008749_060 0.304773658 - - PREDICTED: uncharacterized protein LOC105639821 [Jatropha curcas]
14 Hb_001124_040 0.308552309 - - PREDICTED: uncharacterized protein LOC103413595 [Malus domestica]
15 Hb_000270_520 0.3091630176 - - PREDICTED: alpha-N-acetylglucosaminidase-like isoform X1 [Jatropha curcas]
16 Hb_001922_120 0.3093389397 - - hypothetical protein B456_004G136900 [Gossypium raimondii]
17 Hb_001171_060 0.3107410117 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial [Jatropha curcas]
18 Hb_000045_150 0.3119527639 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
19 Hb_003633_040 0.3143019992 - - hypothetical protein B456_008G146200 [Gossypium raimondii]
20 Hb_176825_010 0.3180986837 - - PREDICTED: uncharacterized protein LOC105630857 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_159921_010 Hb_159921_010 Hb_000853_400 Hb_000853_400 Hb_159921_010--Hb_000853_400 Hb_001008_040 Hb_001008_040 Hb_159921_010--Hb_001008_040 Hb_000432_060 Hb_000432_060 Hb_159921_010--Hb_000432_060 Hb_122408_010 Hb_122408_010 Hb_159921_010--Hb_122408_010 Hb_003327_040 Hb_003327_040 Hb_159921_010--Hb_003327_040 Hb_002666_020 Hb_002666_020 Hb_159921_010--Hb_002666_020 Hb_010427_010 Hb_010427_010 Hb_000853_400--Hb_010427_010 Hb_000270_520 Hb_000270_520 Hb_000853_400--Hb_000270_520 Hb_012738_030 Hb_012738_030 Hb_000853_400--Hb_012738_030 Hb_003449_070 Hb_003449_070 Hb_000853_400--Hb_003449_070 Hb_005976_050 Hb_005976_050 Hb_000853_400--Hb_005976_050 Hb_000212_310 Hb_000212_310 Hb_000853_400--Hb_000212_310 Hb_003609_020 Hb_003609_020 Hb_001008_040--Hb_003609_020 Hb_008225_070 Hb_008225_070 Hb_001008_040--Hb_008225_070 Hb_000045_150 Hb_000045_150 Hb_001008_040--Hb_000045_150 Hb_000500_140 Hb_000500_140 Hb_001008_040--Hb_000500_140 Hb_000733_210 Hb_000733_210 Hb_001008_040--Hb_000733_210 Hb_001171_060 Hb_001171_060 Hb_000432_060--Hb_001171_060 Hb_008770_040 Hb_008770_040 Hb_000432_060--Hb_008770_040 Hb_080952_010 Hb_080952_010 Hb_000432_060--Hb_080952_010 Hb_168697_010 Hb_168697_010 Hb_000432_060--Hb_168697_010 Hb_000442_080 Hb_000442_080 Hb_000432_060--Hb_000442_080 Hb_000140_230 Hb_000140_230 Hb_000432_060--Hb_000140_230 Hb_004204_170 Hb_004204_170 Hb_122408_010--Hb_004204_170 Hb_003050_390 Hb_003050_390 Hb_122408_010--Hb_003050_390 Hb_181810_020 Hb_181810_020 Hb_122408_010--Hb_181810_020 Hb_092408_010 Hb_092408_010 Hb_122408_010--Hb_092408_010 Hb_001178_140 Hb_001178_140 Hb_122408_010--Hb_001178_140 Hb_000680_050 Hb_000680_050 Hb_122408_010--Hb_000680_050 Hb_007441_050 Hb_007441_050 Hb_003327_040--Hb_007441_050 Hb_003327_040--Hb_122408_010 Hb_040747_010 Hb_040747_010 Hb_003327_040--Hb_040747_010 Hb_008749_060 Hb_008749_060 Hb_003327_040--Hb_008749_060 Hb_149714_010 Hb_149714_010 Hb_003327_040--Hb_149714_010 Hb_002666_020--Hb_000733_210 Hb_002666_020--Hb_000853_400 Hb_001636_020 Hb_001636_020 Hb_002666_020--Hb_001636_020 Hb_004724_120 Hb_004724_120 Hb_002666_020--Hb_004724_120 Hb_000544_050 Hb_000544_050 Hb_002666_020--Hb_000544_050 Hb_000193_140 Hb_000193_140 Hb_002666_020--Hb_000193_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0961861 0.444609 0.464193 0.20639 0.181675 1.04097
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.179745 0.84318 0.625843 0

CAGE analysis