Hb_160814_010

Information

Type -
Description -
Location Contig160814: 30236-34491
Sequence    

Annotation

kegg
ID rcu:RCOM_0926970
description sulfate transporter, putative
nr
ID XP_012078649.1
description PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
swissprot
ID Q94LW6
description Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1
trembl
ID A0A067K886
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13227 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sulfate transporter

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_160814_010 0.0 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
2 Hb_000002_150 0.073473928 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000147_010 0.0827907899 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
4 Hb_000127_050 0.0837138325 - - -
5 Hb_000743_070 0.0904682761 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
6 Hb_000705_110 0.1122386331 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
7 Hb_004785_150 0.1143480558 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
8 Hb_003858_050 0.1197235784 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]
9 Hb_004116_090 0.1207917436 - - -
10 Hb_005356_030 0.1258505398 - - protein binding protein, putative [Ricinus communis]
11 Hb_003020_340 0.1275474802 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
12 Hb_000046_550 0.1321749055 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
13 Hb_103452_010 0.1389912605 - - hypothetical protein VITISV_027174 [Vitis vinifera]
14 Hb_020112_010 0.14366636 - - acyltransferase, putative [Ricinus communis]
15 Hb_000925_120 0.1447900016 - - Spotted leaf protein, putative [Ricinus communis]
16 Hb_005305_170 0.1450148404 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
17 Hb_135673_010 0.1503138662 - - Germin-like protein subfamily 1 member 6 precursor [Populus trichocarpa]
18 Hb_001006_050 0.1545258879 - - PREDICTED: uncharacterized protein LOC101777526 [Setaria italica]
19 Hb_000329_570 0.1587741386 - - -
20 Hb_000496_080 0.1610972086 - - Proteinase inhibitor, putative [Ricinus communis]

Gene co-expression network

sample Hb_160814_010 Hb_160814_010 Hb_000002_150 Hb_000002_150 Hb_160814_010--Hb_000002_150 Hb_000147_010 Hb_000147_010 Hb_160814_010--Hb_000147_010 Hb_000127_050 Hb_000127_050 Hb_160814_010--Hb_000127_050 Hb_000743_070 Hb_000743_070 Hb_160814_010--Hb_000743_070 Hb_000705_110 Hb_000705_110 Hb_160814_010--Hb_000705_110 Hb_004785_150 Hb_004785_150 Hb_160814_010--Hb_004785_150 Hb_003020_340 Hb_003020_340 Hb_000002_150--Hb_003020_340 Hb_000002_150--Hb_000147_010 Hb_005356_030 Hb_005356_030 Hb_000002_150--Hb_005356_030 Hb_000925_120 Hb_000925_120 Hb_000002_150--Hb_000925_120 Hb_103452_010 Hb_103452_010 Hb_000002_150--Hb_103452_010 Hb_000147_010--Hb_000925_120 Hb_116783_010 Hb_116783_010 Hb_000147_010--Hb_116783_010 Hb_000147_010--Hb_003020_340 Hb_000147_010--Hb_000705_110 Hb_000127_050--Hb_000743_070 Hb_000046_550 Hb_000046_550 Hb_000127_050--Hb_000046_550 Hb_003858_050 Hb_003858_050 Hb_000127_050--Hb_003858_050 Hb_005305_170 Hb_005305_170 Hb_000127_050--Hb_005305_170 Hb_005551_070 Hb_005551_070 Hb_000127_050--Hb_005551_070 Hb_020112_010 Hb_020112_010 Hb_000743_070--Hb_020112_010 Hb_000743_070--Hb_004785_150 Hb_000496_080 Hb_000496_080 Hb_000743_070--Hb_000496_080 Hb_010308_010 Hb_010308_010 Hb_000743_070--Hb_010308_010 Hb_004330_050 Hb_004330_050 Hb_000743_070--Hb_004330_050 Hb_001633_120 Hb_001633_120 Hb_000705_110--Hb_001633_120 Hb_000705_110--Hb_004785_150 Hb_000705_110--Hb_000743_070 Hb_014865_010 Hb_014865_010 Hb_000705_110--Hb_014865_010 Hb_000329_570 Hb_000329_570 Hb_004785_150--Hb_000329_570 Hb_004785_150--Hb_020112_010 Hb_004785_150--Hb_000496_080 Hb_004785_150--Hb_010308_010 Hb_001300_060 Hb_001300_060 Hb_004785_150--Hb_001300_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00742667 0.0153978 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0142409 0

CAGE analysis