Hb_161045_010

Information

Type -
Description -
Location Contig161045: 243-701
Sequence    

Annotation

kegg
ID egr:104456475
description calmodulin-like protein 3
nr
ID KDP45235.1
description hypothetical protein JCGZ_15100 [Jatropha curcas]
swissprot
ID Q9SRR7
description Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1
trembl
ID A0A067LKN1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15100 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calmodulin-like protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_161045_010 0.0 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
2 Hb_001814_100 0.0746902146 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
3 Hb_000260_130 0.0920353404 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
4 Hb_073973_180 0.1123218491 - - PREDICTED: WAT1-related protein At4g08290 isoform X1 [Populus euphratica]
5 Hb_004242_160 0.1249747302 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
6 Hb_002422_030 0.1297827264 - - E3 ubiquitin-protein ligase UPL5 -like protein [Gossypium arboreum]
7 Hb_001098_020 0.1339581134 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
8 Hb_010417_120 0.1363323877 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005714_140 0.1418725106 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
10 Hb_001511_270 0.141959052 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
11 Hb_004162_030 0.1419663425 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Jatropha curcas]
12 Hb_094839_010 0.1456322704 - - conserved hypothetical protein [Ricinus communis]
13 Hb_011805_060 0.1528239335 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
14 Hb_009393_010 0.1556198209 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
15 Hb_002267_030 0.1587879461 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
16 Hb_000347_360 0.1608376495 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
17 Hb_025477_030 0.1619112519 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
18 Hb_009252_140 0.1630589438 - - Spotted leaf protein, putative [Ricinus communis]
19 Hb_000417_230 0.1662003336 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002475_110 0.1720471081 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]

Gene co-expression network

sample Hb_161045_010 Hb_161045_010 Hb_001814_100 Hb_001814_100 Hb_161045_010--Hb_001814_100 Hb_000260_130 Hb_000260_130 Hb_161045_010--Hb_000260_130 Hb_073973_180 Hb_073973_180 Hb_161045_010--Hb_073973_180 Hb_004242_160 Hb_004242_160 Hb_161045_010--Hb_004242_160 Hb_002422_030 Hb_002422_030 Hb_161045_010--Hb_002422_030 Hb_001098_020 Hb_001098_020 Hb_161045_010--Hb_001098_020 Hb_001814_100--Hb_000260_130 Hb_001814_100--Hb_002422_030 Hb_002267_030 Hb_002267_030 Hb_001814_100--Hb_002267_030 Hb_004162_030 Hb_004162_030 Hb_001814_100--Hb_004162_030 Hb_005714_140 Hb_005714_140 Hb_001814_100--Hb_005714_140 Hb_000260_130--Hb_005714_140 Hb_000260_130--Hb_002267_030 Hb_000260_130--Hb_004242_160 Hb_007305_040 Hb_007305_040 Hb_000260_130--Hb_007305_040 Hb_001511_270 Hb_001511_270 Hb_000260_130--Hb_001511_270 Hb_094839_010 Hb_094839_010 Hb_073973_180--Hb_094839_010 Hb_000417_230 Hb_000417_230 Hb_073973_180--Hb_000417_230 Hb_002107_080 Hb_002107_080 Hb_073973_180--Hb_002107_080 Hb_073973_180--Hb_001098_020 Hb_010573_030 Hb_010573_030 Hb_073973_180--Hb_010573_030 Hb_010417_120 Hb_010417_120 Hb_004242_160--Hb_010417_120 Hb_001477_080 Hb_001477_080 Hb_004242_160--Hb_001477_080 Hb_004242_160--Hb_001511_270 Hb_004242_160--Hb_001098_020 Hb_000529_050 Hb_000529_050 Hb_004242_160--Hb_000529_050 Hb_000313_190 Hb_000313_190 Hb_004242_160--Hb_000313_190 Hb_000840_230 Hb_000840_230 Hb_002422_030--Hb_000840_230 Hb_002422_030--Hb_004162_030 Hb_002820_090 Hb_002820_090 Hb_002422_030--Hb_002820_090 Hb_083862_010 Hb_083862_010 Hb_002422_030--Hb_083862_010 Hb_003071_040 Hb_003071_040 Hb_001098_020--Hb_003071_040 Hb_001098_020--Hb_000313_190 Hb_001098_020--Hb_000529_050 Hb_001098_020--Hb_094839_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.6343 0.15684 0.716161 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.223041

CAGE analysis