Hb_161954_010

Information

Type -
Description -
Location Contig161954: 273-645
Sequence    

Annotation

kegg
ID rcu:RCOM_0476180
description lysosomal pro-X carboxypeptidase, putative (EC:3.4.16.2)
nr
ID KDP43937.1
description hypothetical protein JCGZ_05404 [Jatropha curcas]
swissprot
ID P42785
description Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1
trembl
ID A0A067L686
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05404 PE=4 SV=1
Gene Ontology
ID GO:0004180
description lysosomal pro-x carboxypeptidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_161954_010 0.0 - - hypothetical protein JCGZ_05404 [Jatropha curcas]
2 Hb_004767_010 0.0334686178 - - hypothetical protein CICLE_v10010736mg [Citrus clementina]
3 Hb_002393_060 0.0598029828 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
4 Hb_006816_540 0.1029362313 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
5 Hb_000983_180 0.1260005645 - - cytochrome P450, putative [Ricinus communis]
6 Hb_091826_010 0.1307572812 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
7 Hb_004089_010 0.1377803525 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
8 Hb_003910_030 0.1446206239 - - PREDICTED: probable disease resistance protein At5g66910 [Populus euphratica]
9 Hb_000953_160 0.1446240704 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Ricinus communis]
10 Hb_061641_010 0.1446468633 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
11 Hb_169511_020 0.1446529817 - - PREDICTED: uncharacterized protein LOC105037523, partial [Elaeis guineensis]
12 Hb_004077_010 0.1447242165 - - retinoblastoma-binding protein, putative [Ricinus communis]
13 Hb_103659_010 0.1447597319 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001975_060 0.1452671354 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
15 Hb_003453_070 0.1467793162 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
16 Hb_078439_010 0.1468282351 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
17 Hb_020301_050 0.1474068945 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004668_030 0.1475092819 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
19 Hb_005839_070 0.1475493496 - - hypothetical protein POPTR_0013s08160g [Populus trichocarpa]
20 Hb_162047_010 0.1476190482 - - PREDICTED: protein indeterminate-domain 16 [Jatropha curcas]

Gene co-expression network

sample Hb_161954_010 Hb_161954_010 Hb_004767_010 Hb_004767_010 Hb_161954_010--Hb_004767_010 Hb_002393_060 Hb_002393_060 Hb_161954_010--Hb_002393_060 Hb_006816_540 Hb_006816_540 Hb_161954_010--Hb_006816_540 Hb_000983_180 Hb_000983_180 Hb_161954_010--Hb_000983_180 Hb_091826_010 Hb_091826_010 Hb_161954_010--Hb_091826_010 Hb_004089_010 Hb_004089_010 Hb_161954_010--Hb_004089_010 Hb_004767_010--Hb_002393_060 Hb_004767_010--Hb_091826_010 Hb_004767_010--Hb_004089_010 Hb_004767_010--Hb_000983_180 Hb_004767_010--Hb_006816_540 Hb_002393_060--Hb_004089_010 Hb_002393_060--Hb_091826_010 Hb_002393_060--Hb_006816_540 Hb_162047_010 Hb_162047_010 Hb_002393_060--Hb_162047_010 Hb_007885_120 Hb_007885_120 Hb_006816_540--Hb_007885_120 Hb_006890_050 Hb_006890_050 Hb_006816_540--Hb_006890_050 Hb_001227_010 Hb_001227_010 Hb_006816_540--Hb_001227_010 Hb_000770_020 Hb_000770_020 Hb_000983_180--Hb_000770_020 Hb_011045_020 Hb_011045_020 Hb_000983_180--Hb_011045_020 Hb_010374_010 Hb_010374_010 Hb_000983_180--Hb_010374_010 Hb_005839_070 Hb_005839_070 Hb_000983_180--Hb_005839_070 Hb_000302_050 Hb_000302_050 Hb_000983_180--Hb_000302_050 Hb_126916_010 Hb_126916_010 Hb_000983_180--Hb_126916_010 Hb_015183_050 Hb_015183_050 Hb_091826_010--Hb_015183_050 Hb_004961_010 Hb_004961_010 Hb_091826_010--Hb_004961_010 Hb_008289_020 Hb_008289_020 Hb_091826_010--Hb_008289_020 Hb_081065_010 Hb_081065_010 Hb_091826_010--Hb_081065_010 Hb_021485_010 Hb_021485_010 Hb_091826_010--Hb_021485_010 Hb_012753_100 Hb_012753_100 Hb_091826_010--Hb_012753_100 Hb_001998_130 Hb_001998_130 Hb_004089_010--Hb_001998_130 Hb_004089_010--Hb_091826_010 Hb_001131_100 Hb_001131_100 Hb_004089_010--Hb_001131_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.16558 0 3.20319 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.273688 0

CAGE analysis