Hb_161981_010

Information

Type -
Description -
Location Contig161981: 11758-12393
Sequence    

Annotation

kegg
ID mus:103980102
description probable leucine-rich repeat receptor-like protein kinase At5g63930
nr
ID KHG11139.1
description brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
swissprot
ID C0LGD6
description Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1
trembl
ID A0A0B0NH61
description Brassinosteroid insensitive 1-like protein OS=Gossypium arboreum GN=F383_12883 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_161981_010 0.0 - - brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
2 Hb_086122_030 0.0235295206 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
3 Hb_060272_010 0.0677938345 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
4 Hb_000521_350 0.0736216641 - - unnamed protein product [Vitis vinifera]
5 Hb_000155_270 0.0852671956 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
6 Hb_006268_010 0.1046077572 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
7 Hb_148817_010 0.1058607784 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
8 Hb_001157_130 0.1071756101 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
9 Hb_095532_010 0.1092085372 - - BnaC05g27570D [Brassica napus]
10 Hb_005056_030 0.1221274199 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
11 Hb_017866_010 0.1234197567 - - kinase family protein [Populus trichocarpa]
12 Hb_000761_030 0.1242203955 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
13 Hb_000081_030 0.1276184214 - - BnaC09g05810D [Brassica napus]
14 Hb_007850_040 0.1352996148 - - conserved hypothetical protein [Ricinus communis]
15 Hb_014115_010 0.1388201382 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_112011_010 0.1414252299 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
17 Hb_132438_010 0.1486358061 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
18 Hb_004724_010 0.1504505498 - - -
19 Hb_001821_030 0.1514412316 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
20 Hb_009543_040 0.1545891782 - - -

Gene co-expression network

sample Hb_161981_010 Hb_161981_010 Hb_086122_030 Hb_086122_030 Hb_161981_010--Hb_086122_030 Hb_060272_010 Hb_060272_010 Hb_161981_010--Hb_060272_010 Hb_000521_350 Hb_000521_350 Hb_161981_010--Hb_000521_350 Hb_000155_270 Hb_000155_270 Hb_161981_010--Hb_000155_270 Hb_006268_010 Hb_006268_010 Hb_161981_010--Hb_006268_010 Hb_148817_010 Hb_148817_010 Hb_161981_010--Hb_148817_010 Hb_086122_030--Hb_060272_010 Hb_086122_030--Hb_000155_270 Hb_086122_030--Hb_000521_350 Hb_001157_130 Hb_001157_130 Hb_086122_030--Hb_001157_130 Hb_086122_030--Hb_006268_010 Hb_060272_010--Hb_001157_130 Hb_060272_010--Hb_000155_270 Hb_017866_010 Hb_017866_010 Hb_060272_010--Hb_017866_010 Hb_132438_010 Hb_132438_010 Hb_060272_010--Hb_132438_010 Hb_000521_350--Hb_148817_010 Hb_000521_350--Hb_060272_010 Hb_000059_110 Hb_000059_110 Hb_000521_350--Hb_000059_110 Hb_001821_030 Hb_001821_030 Hb_000521_350--Hb_001821_030 Hb_000155_270--Hb_006268_010 Hb_000155_270--Hb_001157_130 Hb_007850_040 Hb_007850_040 Hb_000155_270--Hb_007850_040 Hb_006268_010--Hb_007850_040 Hb_005056_030 Hb_005056_030 Hb_006268_010--Hb_005056_030 Hb_002622_020 Hb_002622_020 Hb_006268_010--Hb_002622_020 Hb_006268_010--Hb_060272_010 Hb_095532_010 Hb_095532_010 Hb_148817_010--Hb_095532_010 Hb_000081_030 Hb_000081_030 Hb_148817_010--Hb_000081_030 Hb_004875_040 Hb_004875_040 Hb_148817_010--Hb_004875_040 Hb_000032_330 Hb_000032_330 Hb_148817_010--Hb_000032_330 Hb_006314_020 Hb_006314_020 Hb_148817_010--Hb_006314_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.589576 0 1.38389 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.2316 0

CAGE analysis