Hb_161994_020

Information

Type -
Description -
Location Contig161994: 13209-14383
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_161994_020 0.0 - - -
2 Hb_004939_020 0.2955930426 - - gag/pol protein [Bryonia dioica]
3 Hb_001269_560 0.2957052553 - - heat-shock protein 70 [Hevea brasiliensis]
4 Hb_002417_060 0.3088606275 - - Cell division cycle protein, putative [Ricinus communis]
5 Hb_134310_030 0.3091068037 - - hypothetical protein JCGZ_10790 [Jatropha curcas]
6 Hb_003337_070 0.3127224926 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
7 Hb_063716_070 0.3156428694 - - hypothetical protein PRUPE_ppa020565mg [Prunus persica]
8 Hb_004846_180 0.3190990569 - - heat shock protein, putative [Ricinus communis]
9 Hb_000563_220 0.3204730694 - - hypothetical protein VITISV_004111 [Vitis vinifera]
10 Hb_125948_020 0.3236321312 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
11 Hb_001279_230 0.3236445318 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
12 Hb_000853_300 0.3258463622 - - -
13 Hb_000684_340 0.3261426491 - - PREDICTED: L-ascorbate peroxidase 2, cytosolic [Pyrus x bretschneideri]
14 Hb_004846_170 0.3267724359 - - heat-shock protein 70 [Hevea brasiliensis]
15 Hb_002185_010 0.3268170471 - - PREDICTED: uncharacterized protein LOC105795658 [Gossypium raimondii]
16 Hb_003609_010 0.331750161 - - -
17 Hb_000140_370 0.3321277193 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
18 Hb_001723_110 0.3351003499 - - PREDICTED: solute carrier family 25 member 44-like isoform X2 [Malus domestica]
19 Hb_184326_010 0.3374713091 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
20 Hb_025194_030 0.3399341908 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]

Gene co-expression network

sample Hb_161994_020 Hb_161994_020 Hb_004939_020 Hb_004939_020 Hb_161994_020--Hb_004939_020 Hb_001269_560 Hb_001269_560 Hb_161994_020--Hb_001269_560 Hb_002417_060 Hb_002417_060 Hb_161994_020--Hb_002417_060 Hb_134310_030 Hb_134310_030 Hb_161994_020--Hb_134310_030 Hb_003337_070 Hb_003337_070 Hb_161994_020--Hb_003337_070 Hb_063716_070 Hb_063716_070 Hb_161994_020--Hb_063716_070 Hb_003816_020 Hb_003816_020 Hb_004939_020--Hb_003816_020 Hb_022452_010 Hb_022452_010 Hb_004939_020--Hb_022452_010 Hb_171659_010 Hb_171659_010 Hb_004939_020--Hb_171659_010 Hb_000205_070 Hb_000205_070 Hb_004939_020--Hb_000205_070 Hb_009189_030 Hb_009189_030 Hb_004939_020--Hb_009189_030 Hb_004939_020--Hb_003337_070 Hb_004846_170 Hb_004846_170 Hb_001269_560--Hb_004846_170 Hb_000140_370 Hb_000140_370 Hb_001269_560--Hb_000140_370 Hb_000684_340 Hb_000684_340 Hb_001269_560--Hb_000684_340 Hb_125948_020 Hb_125948_020 Hb_001269_560--Hb_125948_020 Hb_004846_180 Hb_004846_180 Hb_001269_560--Hb_004846_180 Hb_003647_120 Hb_003647_120 Hb_001269_560--Hb_003647_120 Hb_006501_060 Hb_006501_060 Hb_002417_060--Hb_006501_060 Hb_027428_030 Hb_027428_030 Hb_002417_060--Hb_027428_030 Hb_001660_090 Hb_001660_090 Hb_002417_060--Hb_001660_090 Hb_003398_010 Hb_003398_010 Hb_002417_060--Hb_003398_010 Hb_026437_010 Hb_026437_010 Hb_002417_060--Hb_026437_010 Hb_001301_190 Hb_001301_190 Hb_002417_060--Hb_001301_190 Hb_001268_100 Hb_001268_100 Hb_134310_030--Hb_001268_100 Hb_000482_060 Hb_000482_060 Hb_134310_030--Hb_000482_060 Hb_107500_010 Hb_107500_010 Hb_134310_030--Hb_107500_010 Hb_134310_030--Hb_027428_030 Hb_000173_480 Hb_000173_480 Hb_134310_030--Hb_000173_480 Hb_000627_100 Hb_000627_100 Hb_134310_030--Hb_000627_100 Hb_006745_020 Hb_006745_020 Hb_003337_070--Hb_006745_020 Hb_003337_070--Hb_000205_070 Hb_003337_070--Hb_003647_120 Hb_001279_230 Hb_001279_230 Hb_003337_070--Hb_001279_230 Hb_003337_070--Hb_009189_030 Hb_184326_010 Hb_184326_010 Hb_003337_070--Hb_184326_010 Hb_001723_110 Hb_001723_110 Hb_063716_070--Hb_001723_110 Hb_063716_070--Hb_003647_120 Hb_006846_100 Hb_006846_100 Hb_063716_070--Hb_006846_100 Hb_063716_070--Hb_001279_230 Hb_063716_070--Hb_003337_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.293895 0.948715 0 0 1.25949 0.201365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.380236 0 0 0

CAGE analysis