Hb_162033_010

Information

Type -
Description -
Location Contig162033: 109-596
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162033_010 0.0 - - -
2 Hb_000258_100 0.2224924622 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000258_450 0.2329396505 - - -
4 Hb_054865_140 0.2415517048 - - -
5 Hb_000270_610 0.262000833 - - PREDICTED: uncharacterized protein At5g50100, mitochondrial [Jatropha curcas]
6 Hb_124567_020 0.2621118342 - - PREDICTED: pentatricopeptide repeat-containing protein At2g21090 [Jatropha curcas]
7 Hb_101133_020 0.2655500682 - - PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Jatropha curcas]
8 Hb_000530_120 0.268309725 - - copper transport protein ATOX1 [Hevea brasiliensis]
9 Hb_000575_020 0.2715027802 - - PREDICTED: copper-transporting ATPase PAA1, chloroplastic [Jatropha curcas]
10 Hb_007520_010 0.2746248231 - - PREDICTED: uncharacterized protein LOC105640383 [Jatropha curcas]
11 Hb_004218_210 0.2760850726 transcription factor TF Family: Orphans hypothetical protein JCGZ_24525 [Jatropha curcas]
12 Hb_004108_090 0.281815434 - - PREDICTED: uncharacterized protein LOC105650231 [Jatropha curcas]
13 Hb_009485_010 0.2823842668 - - PREDICTED: uncharacterized protein LOC105641071 [Jatropha curcas]
14 Hb_000310_070 0.288865888 - - BnaA06g08330D [Brassica napus]
15 Hb_000906_130 0.2897878988 - - -
16 Hb_002936_080 0.2915146822 - - Protein bem46, putative [Ricinus communis]
17 Hb_003336_030 0.2928614298 - - transcription factor, putative [Ricinus communis]
18 Hb_000260_200 0.2935224828 - - -
19 Hb_001159_200 0.2943195714 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Jatropha curcas]
20 Hb_003124_060 0.2961107404 - - Beta-ureidopropionase, putative [Ricinus communis]

Gene co-expression network

sample Hb_162033_010 Hb_162033_010 Hb_000258_100 Hb_000258_100 Hb_162033_010--Hb_000258_100 Hb_000258_450 Hb_000258_450 Hb_162033_010--Hb_000258_450 Hb_054865_140 Hb_054865_140 Hb_162033_010--Hb_054865_140 Hb_000270_610 Hb_000270_610 Hb_162033_010--Hb_000270_610 Hb_124567_020 Hb_124567_020 Hb_162033_010--Hb_124567_020 Hb_101133_020 Hb_101133_020 Hb_162033_010--Hb_101133_020 Hb_007520_010 Hb_007520_010 Hb_000258_100--Hb_007520_010 Hb_000258_100--Hb_101133_020 Hb_107504_010 Hb_107504_010 Hb_000258_100--Hb_107504_010 Hb_104010_010 Hb_104010_010 Hb_000258_100--Hb_104010_010 Hb_004108_090 Hb_004108_090 Hb_000258_100--Hb_004108_090 Hb_000169_140 Hb_000169_140 Hb_000258_100--Hb_000169_140 Hb_004448_060 Hb_004448_060 Hb_000258_450--Hb_004448_060 Hb_004218_210 Hb_004218_210 Hb_000258_450--Hb_004218_210 Hb_000906_130 Hb_000906_130 Hb_000258_450--Hb_000906_130 Hb_001863_420 Hb_001863_420 Hb_000258_450--Hb_001863_420 Hb_003124_060 Hb_003124_060 Hb_000258_450--Hb_003124_060 Hb_000935_030 Hb_000935_030 Hb_054865_140--Hb_000935_030 Hb_003336_030 Hb_003336_030 Hb_054865_140--Hb_003336_030 Hb_005649_020 Hb_005649_020 Hb_054865_140--Hb_005649_020 Hb_000390_110 Hb_000390_110 Hb_054865_140--Hb_000390_110 Hb_000208_120 Hb_000208_120 Hb_054865_140--Hb_000208_120 Hb_000111_100 Hb_000111_100 Hb_000270_610--Hb_000111_100 Hb_002391_220 Hb_002391_220 Hb_000270_610--Hb_002391_220 Hb_000530_120 Hb_000530_120 Hb_000270_610--Hb_000530_120 Hb_000445_490 Hb_000445_490 Hb_000270_610--Hb_000445_490 Hb_000260_200 Hb_000260_200 Hb_000270_610--Hb_000260_200 Hb_000599_280 Hb_000599_280 Hb_000270_610--Hb_000599_280 Hb_178968_160 Hb_178968_160 Hb_124567_020--Hb_178968_160 Hb_000696_220 Hb_000696_220 Hb_124567_020--Hb_000696_220 Hb_124567_020--Hb_001863_420 Hb_003181_050 Hb_003181_050 Hb_124567_020--Hb_003181_050 Hb_089100_020 Hb_089100_020 Hb_124567_020--Hb_089100_020 Hb_002918_140 Hb_002918_140 Hb_124567_020--Hb_002918_140 Hb_000365_080 Hb_000365_080 Hb_101133_020--Hb_000365_080 Hb_005211_190 Hb_005211_190 Hb_101133_020--Hb_005211_190 Hb_001424_020 Hb_001424_020 Hb_101133_020--Hb_001424_020 Hb_000320_180 Hb_000320_180 Hb_101133_020--Hb_000320_180 Hb_148909_020 Hb_148909_020 Hb_101133_020--Hb_148909_020 Hb_000159_070 Hb_000159_070 Hb_101133_020--Hb_000159_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.089946 0 0.0766106 0 0.0911461 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.640803 0.671159 0.265476 0 0.291242

CAGE analysis