Hb_162557_010

Information

Type -
Description -
Location Contig162557: 442-1416
Sequence    

Annotation

kegg
ID pop:POPTR_0010s11090g
description POPTRDRAFT_822038; hypothetical protein
nr
ID XP_012072401.1
description PREDICTED: uncharacterized protein LOC105634192 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPR9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04839 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162557_010 0.0 - - PREDICTED: uncharacterized protein LOC105634192 [Jatropha curcas]
2 Hb_000297_180 0.123071947 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
3 Hb_012368_080 0.1294333021 - - PREDICTED: uncharacterized protein LOC105126277 [Populus euphratica]
4 Hb_000347_530 0.1338833213 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
5 Hb_002521_010 0.1399063886 - - cinnamate 4-hydroxylase, putative [Ricinus communis]
6 Hb_028008_010 0.1434799348 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
7 Hb_000513_100 0.1442697946 - - germin-like protein GLP, partial [Manihot esculenta]
8 Hb_000934_170 0.147635421 - - alcohol dehydrogenase, putative [Ricinus communis]
9 Hb_012779_010 0.1490581042 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
10 Hb_002747_010 0.1498476185 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
11 Hb_153457_010 0.1508403715 - - Miraculin precursor, putative [Ricinus communis]
12 Hb_003392_030 0.1560781651 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002966_030 0.1566757214 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000739_130 0.1576734975 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003893_100 0.1577535257 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
16 Hb_018591_010 0.1588562932 - - kinase, putative [Ricinus communis]
17 Hb_002475_070 0.1624707063 - - hypothetical protein POPTR_0017s02440g, partial [Populus trichocarpa]
18 Hb_098030_010 0.164566418 - - hypothetical protein JCGZ_06251 [Jatropha curcas]
19 Hb_002301_420 0.1664203227 transcription factor TF Family: bHLH hypothetical protein POPTR_0011s05320g [Populus trichocarpa]
20 Hb_144783_010 0.1666718953 - - glutathione s-transferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_162557_010 Hb_162557_010 Hb_000297_180 Hb_000297_180 Hb_162557_010--Hb_000297_180 Hb_012368_080 Hb_012368_080 Hb_162557_010--Hb_012368_080 Hb_000347_530 Hb_000347_530 Hb_162557_010--Hb_000347_530 Hb_002521_010 Hb_002521_010 Hb_162557_010--Hb_002521_010 Hb_028008_010 Hb_028008_010 Hb_162557_010--Hb_028008_010 Hb_000513_100 Hb_000513_100 Hb_162557_010--Hb_000513_100 Hb_003893_100 Hb_003893_100 Hb_000297_180--Hb_003893_100 Hb_004316_130 Hb_004316_130 Hb_000297_180--Hb_004316_130 Hb_000297_180--Hb_012368_080 Hb_144783_010 Hb_144783_010 Hb_000297_180--Hb_144783_010 Hb_035583_010 Hb_035583_010 Hb_000297_180--Hb_035583_010 Hb_002475_070 Hb_002475_070 Hb_000297_180--Hb_002475_070 Hb_012368_080--Hb_003893_100 Hb_006637_040 Hb_006637_040 Hb_012368_080--Hb_006637_040 Hb_018591_010 Hb_018591_010 Hb_012368_080--Hb_018591_010 Hb_098030_010 Hb_098030_010 Hb_012368_080--Hb_098030_010 Hb_002301_420 Hb_002301_420 Hb_012368_080--Hb_002301_420 Hb_000347_530--Hb_018591_010 Hb_004544_070 Hb_004544_070 Hb_000347_530--Hb_004544_070 Hb_000934_170 Hb_000934_170 Hb_000347_530--Hb_000934_170 Hb_000347_530--Hb_002301_420 Hb_002749_070 Hb_002749_070 Hb_000347_530--Hb_002749_070 Hb_010407_120 Hb_010407_120 Hb_000347_530--Hb_010407_120 Hb_002521_010--Hb_028008_010 Hb_000200_180 Hb_000200_180 Hb_002521_010--Hb_000200_180 Hb_006153_190 Hb_006153_190 Hb_002521_010--Hb_006153_190 Hb_000021_090 Hb_000021_090 Hb_002521_010--Hb_000021_090 Hb_002521_010--Hb_144783_010 Hb_002521_010--Hb_000513_100 Hb_028008_010--Hb_000513_100 Hb_175167_020 Hb_175167_020 Hb_028008_010--Hb_175167_020 Hb_153457_010 Hb_153457_010 Hb_028008_010--Hb_153457_010 Hb_028008_010--Hb_000021_090 Hb_002966_030 Hb_002966_030 Hb_028008_010--Hb_002966_030 Hb_012779_010 Hb_012779_010 Hb_000513_100--Hb_012779_010 Hb_000513_100--Hb_153457_010 Hb_000513_100--Hb_175167_020 Hb_001189_030 Hb_001189_030 Hb_000513_100--Hb_001189_030 Hb_002747_010 Hb_002747_010 Hb_000513_100--Hb_002747_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0334721 0.208642 0.809974 2.9436 0.0314098 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.326193 12.4561 0.120557

CAGE analysis