Hb_163256_020

Information

Type -
Description -
Location Contig163256: 25784-30783
Sequence    

Annotation

kegg
ID pmum:103333278
description fructokinase-1
nr
ID AJK93566.1
description fructokinase [Manihot esculenta]
swissprot
ID Q9FLH8
description Probable fructokinase-7 OS=Arabidopsis thaliana GN=At5g51830 PE=1 SV=1
trembl
ID A0A0C5AWG7
description FRK2 protein OS=Manihot esculenta GN=FRK2 PE=2 SV=1
Gene Ontology
ID GO:0005829
description probable fructokinase-7 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14873: 26053-26185 , PASA_asmbl_14874: 26213-30755 , PASA_asmbl_14875: 28694-29960
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_163256_020 0.0 - - fructokinase [Manihot esculenta]
2 Hb_004324_090 0.0646708362 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
3 Hb_000465_300 0.0669268354 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
4 Hb_006256_030 0.0731589803 - - PREDICTED: putative cyclic nucleotide-gated ion channel 18 [Jatropha curcas]
5 Hb_158445_010 0.0757642108 - - PREDICTED: cysteine protease ATG4-like isoform X1 [Jatropha curcas]
6 Hb_022318_020 0.0778658045 - - hypothetical protein JCGZ_00541 [Jatropha curcas]
7 Hb_000310_020 0.0856095938 - - hypothetical protein JCGZ_20797 [Jatropha curcas]
8 Hb_003994_260 0.0861270311 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
9 Hb_002701_010 0.0885793896 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
10 Hb_000221_190 0.0888652917 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
11 Hb_002534_100 0.091392476 - - PREDICTED: malate dehydrogenase, chloroplastic [Jatropha curcas]
12 Hb_001648_030 0.0940064541 - - PREDICTED: uncharacterized protein LOC105628931 isoform X2 [Jatropha curcas]
13 Hb_002239_050 0.0940299891 - - PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial [Jatropha curcas]
14 Hb_000424_200 0.0943137632 - - hypothetical protein JCGZ_07583 [Jatropha curcas]
15 Hb_002631_180 0.0949658401 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas]
16 Hb_000099_150 0.0952020192 - - PREDICTED: calcium-dependent protein kinase 3 [Jatropha curcas]
17 Hb_000856_010 0.096433036 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
18 Hb_017987_050 0.0976185975 - - PREDICTED: branched-chain-amino-acid aminotransferase 5, chloroplastic-like [Jatropha curcas]
19 Hb_006615_240 0.099246974 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
20 Hb_007218_120 0.0995797014 - - PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_163256_020 Hb_163256_020 Hb_004324_090 Hb_004324_090 Hb_163256_020--Hb_004324_090 Hb_000465_300 Hb_000465_300 Hb_163256_020--Hb_000465_300 Hb_006256_030 Hb_006256_030 Hb_163256_020--Hb_006256_030 Hb_158445_010 Hb_158445_010 Hb_163256_020--Hb_158445_010 Hb_022318_020 Hb_022318_020 Hb_163256_020--Hb_022318_020 Hb_000310_020 Hb_000310_020 Hb_163256_020--Hb_000310_020 Hb_004324_090--Hb_158445_010 Hb_004324_090--Hb_000310_020 Hb_000069_420 Hb_000069_420 Hb_004324_090--Hb_000069_420 Hb_006615_240 Hb_006615_240 Hb_004324_090--Hb_006615_240 Hb_000856_010 Hb_000856_010 Hb_004324_090--Hb_000856_010 Hb_000749_050 Hb_000749_050 Hb_000465_300--Hb_000749_050 Hb_000173_470 Hb_000173_470 Hb_000465_300--Hb_000173_470 Hb_000723_230 Hb_000723_230 Hb_000465_300--Hb_000723_230 Hb_000890_150 Hb_000890_150 Hb_000465_300--Hb_000890_150 Hb_002045_070 Hb_002045_070 Hb_000465_300--Hb_002045_070 Hb_002060_010 Hb_002060_010 Hb_006256_030--Hb_002060_010 Hb_006256_030--Hb_022318_020 Hb_006256_030--Hb_158445_010 Hb_001718_030 Hb_001718_030 Hb_006256_030--Hb_001718_030 Hb_002260_010 Hb_002260_010 Hb_006256_030--Hb_002260_010 Hb_000327_060 Hb_000327_060 Hb_158445_010--Hb_000327_060 Hb_005162_060 Hb_005162_060 Hb_158445_010--Hb_005162_060 Hb_004143_150 Hb_004143_150 Hb_158445_010--Hb_004143_150 Hb_158445_010--Hb_000310_020 Hb_002701_010 Hb_002701_010 Hb_022318_020--Hb_002701_010 Hb_000448_050 Hb_000448_050 Hb_022318_020--Hb_000448_050 Hb_001648_030 Hb_001648_030 Hb_022318_020--Hb_001648_030 Hb_001016_100 Hb_001016_100 Hb_022318_020--Hb_001016_100 Hb_000505_130 Hb_000505_130 Hb_000310_020--Hb_000505_130 Hb_000221_190 Hb_000221_190 Hb_000310_020--Hb_000221_190 Hb_000161_130 Hb_000161_130 Hb_000310_020--Hb_000161_130 Hb_000310_020--Hb_006615_240 Hb_003124_150 Hb_003124_150 Hb_000310_020--Hb_003124_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.8849 27.2388 24.0867 27.4845 13.5475 10.0833
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.6982 50.9787 31.5058 26.1621 23.6444

CAGE analysis