Hb_164010_050

Information

Type -
Description -
Location Contig164010: 32360-38662
Sequence    

Annotation

kegg
ID cic:CICLE_v10008869mg
description hypothetical protein
nr
ID XP_012071048.1
description PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
swissprot
ID P46250
description SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1
trembl
ID A0A067L481
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01057 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15075: 31563-32044 , PASA_asmbl_15076: 31225-38707 , PASA_asmbl_15077: 37551-37996
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164010_050 0.0 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
2 Hb_051257_010 0.0874462333 - - -
3 Hb_000866_070 0.1033693879 - - PREDICTED: LOW QUALITY PROTEIN: SKP1-like protein 21 [Jatropha curcas]
4 Hb_000000_330 0.1036542017 - - PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas]
5 Hb_000258_220 0.1055535741 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
6 Hb_074399_010 0.1061914775 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
7 Hb_000503_020 0.1084090872 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
8 Hb_000154_050 0.1122814201 - - CMP-sialic acid transporter, putative [Ricinus communis]
9 Hb_000001_090 0.1123255156 - - PREDICTED: uncharacterized protein At3g58460 [Populus euphratica]
10 Hb_003540_080 0.1146697755 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
11 Hb_000152_190 0.1150149138 - - PREDICTED: K(+) efflux antiporter 5 [Jatropha curcas]
12 Hb_029584_120 0.1150355144 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
13 Hb_002942_230 0.115122969 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]
14 Hb_000134_120 0.1161030611 - - PREDICTED: uncharacterized protein LOC105628669 [Jatropha curcas]
15 Hb_005064_010 0.1162807794 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
16 Hb_000889_100 0.1166885184 - - PREDICTED: syntaxin-132-like isoform X2 [Sesamum indicum]
17 Hb_004730_020 0.1169579608 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
18 Hb_006588_160 0.118045209 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
19 Hb_000072_300 0.1194463893 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
20 Hb_000510_150 0.1205525903 - - PREDICTED: magnesium transporter MRS2-I-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_164010_050 Hb_164010_050 Hb_051257_010 Hb_051257_010 Hb_164010_050--Hb_051257_010 Hb_000866_070 Hb_000866_070 Hb_164010_050--Hb_000866_070 Hb_000000_330 Hb_000000_330 Hb_164010_050--Hb_000000_330 Hb_000258_220 Hb_000258_220 Hb_164010_050--Hb_000258_220 Hb_074399_010 Hb_074399_010 Hb_164010_050--Hb_074399_010 Hb_000503_020 Hb_000503_020 Hb_164010_050--Hb_000503_020 Hb_000889_100 Hb_000889_100 Hb_051257_010--Hb_000889_100 Hb_000684_260 Hb_000684_260 Hb_051257_010--Hb_000684_260 Hb_134429_010 Hb_134429_010 Hb_051257_010--Hb_134429_010 Hb_000094_290 Hb_000094_290 Hb_051257_010--Hb_000094_290 Hb_010003_010 Hb_010003_010 Hb_051257_010--Hb_010003_010 Hb_000001_090 Hb_000001_090 Hb_000866_070--Hb_000001_090 Hb_002942_230 Hb_002942_230 Hb_000866_070--Hb_002942_230 Hb_029584_120 Hb_029584_120 Hb_000866_070--Hb_029584_120 Hb_000968_060 Hb_000968_060 Hb_000866_070--Hb_000968_060 Hb_001411_130 Hb_001411_130 Hb_000866_070--Hb_001411_130 Hb_002217_080 Hb_002217_080 Hb_000866_070--Hb_002217_080 Hb_000000_330--Hb_074399_010 Hb_006775_120 Hb_006775_120 Hb_000000_330--Hb_006775_120 Hb_000003_030 Hb_000003_030 Hb_000000_330--Hb_000003_030 Hb_002783_220 Hb_002783_220 Hb_000000_330--Hb_002783_220 Hb_003540_050 Hb_003540_050 Hb_000000_330--Hb_003540_050 Hb_000258_220--Hb_029584_120 Hb_000134_120 Hb_000134_120 Hb_000258_220--Hb_000134_120 Hb_000258_220--Hb_000503_020 Hb_000258_220--Hb_074399_010 Hb_000054_040 Hb_000054_040 Hb_000258_220--Hb_000054_040 Hb_003540_080 Hb_003540_080 Hb_000258_220--Hb_003540_080 Hb_000703_160 Hb_000703_160 Hb_074399_010--Hb_000703_160 Hb_074399_010--Hb_029584_120 Hb_003687_080 Hb_003687_080 Hb_074399_010--Hb_003687_080 Hb_007919_110 Hb_007919_110 Hb_074399_010--Hb_007919_110 Hb_004013_030 Hb_004013_030 Hb_074399_010--Hb_004013_030 Hb_000503_020--Hb_000054_040 Hb_005062_110 Hb_005062_110 Hb_000503_020--Hb_005062_110 Hb_000320_290 Hb_000320_290 Hb_000503_020--Hb_000320_290 Hb_000085_260 Hb_000085_260 Hb_000503_020--Hb_000085_260 Hb_006120_050 Hb_006120_050 Hb_000503_020--Hb_006120_050 Hb_001246_130 Hb_001246_130 Hb_000503_020--Hb_001246_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.97972 3.29444 10.6105 13.1345 2.26692 4.88147
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.68027 1.7241 1.55684 3.74676 5.19796

CAGE analysis