Hb_164225_010

Information

Type -
Description -
Location Contig164225: 1994-5703
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164225_010 0.0 - - -
2 Hb_049884_010 0.2108114978 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_003391_050 0.2556305751 - - -
4 Hb_055339_010 0.2635575543 - - EARLY-RESPONSIVE TO DEHYDRATION 7 family protein [Populus trichocarpa]
5 Hb_003772_020 0.286553568 - - PREDICTED: uncharacterized protein LOC105037131, partial [Elaeis guineensis]
6 Hb_002737_020 0.3045380362 - - metallothionein [Bruguiera gymnorhiza]
7 Hb_036693_010 0.31281233 - - -
8 Hb_010447_020 0.3132218431 - - PREDICTED: uncharacterized protein LOC105797464 [Gossypium raimondii]
9 Hb_007188_060 0.3154299155 - - -
10 Hb_001673_030 0.3245466534 - - hypothetical protein JCGZ_08729 [Jatropha curcas]
11 Hb_114250_010 0.3340442696 - - conserved hypothetical protein [Ricinus communis]
12 Hb_012107_070 0.3353632543 - - -
13 Hb_097433_020 0.3372454849 - - ATP-binding cassette transporter, putative [Ricinus communis]
14 Hb_111834_020 0.3378683897 - - PREDICTED: protein phosphatase methylesterase 1 [Jatropha curcas]
15 Hb_002805_140 0.3378925839 - - hypothetical protein POPTR_0001s28390g [Populus trichocarpa]
16 Hb_032076_010 0.3429324639 - - -
17 Hb_000792_080 0.3543174454 - - hypothetical protein B456_012G111300, partial [Gossypium raimondii]
18 Hb_034667_020 0.3607632182 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000579_150 0.3632062448 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
20 Hb_003292_060 0.3675865934 - - PREDICTED: transcription factor HBP-1b(c38) [Jatropha curcas]

Gene co-expression network

sample Hb_164225_010 Hb_164225_010 Hb_049884_010 Hb_049884_010 Hb_164225_010--Hb_049884_010 Hb_003391_050 Hb_003391_050 Hb_164225_010--Hb_003391_050 Hb_055339_010 Hb_055339_010 Hb_164225_010--Hb_055339_010 Hb_003772_020 Hb_003772_020 Hb_164225_010--Hb_003772_020 Hb_002737_020 Hb_002737_020 Hb_164225_010--Hb_002737_020 Hb_036693_010 Hb_036693_010 Hb_164225_010--Hb_036693_010 Hb_011942_030 Hb_011942_030 Hb_049884_010--Hb_011942_030 Hb_007188_060 Hb_007188_060 Hb_049884_010--Hb_007188_060 Hb_004800_210 Hb_004800_210 Hb_049884_010--Hb_004800_210 Hb_114250_010 Hb_114250_010 Hb_049884_010--Hb_114250_010 Hb_004117_250 Hb_004117_250 Hb_049884_010--Hb_004117_250 Hb_002805_140 Hb_002805_140 Hb_003391_050--Hb_002805_140 Hb_023647_040 Hb_023647_040 Hb_003391_050--Hb_023647_040 Hb_000334_200 Hb_000334_200 Hb_003391_050--Hb_000334_200 Hb_003391_050--Hb_036693_010 Hb_001396_170 Hb_001396_170 Hb_003391_050--Hb_001396_170 Hb_000997_010 Hb_000997_010 Hb_055339_010--Hb_000997_010 Hb_076233_020 Hb_076233_020 Hb_055339_010--Hb_076233_020 Hb_014361_050 Hb_014361_050 Hb_055339_010--Hb_014361_050 Hb_004570_050 Hb_004570_050 Hb_055339_010--Hb_004570_050 Hb_055339_010--Hb_036693_010 Hb_055339_010--Hb_007188_060 Hb_000014_130 Hb_000014_130 Hb_003772_020--Hb_000014_130 Hb_032018_010 Hb_032018_010 Hb_003772_020--Hb_032018_010 Hb_000062_500 Hb_000062_500 Hb_003772_020--Hb_000062_500 Hb_007978_020 Hb_007978_020 Hb_003772_020--Hb_007978_020 Hb_041237_010 Hb_041237_010 Hb_003772_020--Hb_041237_010 Hb_010447_020 Hb_010447_020 Hb_003772_020--Hb_010447_020 Hb_018118_020 Hb_018118_020 Hb_002737_020--Hb_018118_020 Hb_000123_020 Hb_000123_020 Hb_002737_020--Hb_000123_020 Hb_000123_030 Hb_000123_030 Hb_002737_020--Hb_000123_030 Hb_002737_020--Hb_076233_020 Hb_097433_020 Hb_097433_020 Hb_002737_020--Hb_097433_020 Hb_002737_020--Hb_003772_020 Hb_005155_020 Hb_005155_020 Hb_036693_010--Hb_005155_020 Hb_005517_010 Hb_005517_010 Hb_036693_010--Hb_005517_010 Hb_000169_190 Hb_000169_190 Hb_036693_010--Hb_000169_190 Hb_012107_070 Hb_012107_070 Hb_036693_010--Hb_012107_070 Hb_000099_090 Hb_000099_090 Hb_036693_010--Hb_000099_090 Hb_012184_050 Hb_012184_050 Hb_036693_010--Hb_012184_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.056607 0.0586493 0.0435356 0 0 0.0508014
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis