Hb_164255_010

Information

Type -
Description -
Location Contig164255: 322-655
Sequence    

Annotation

kegg
ID rcu:RCOM_0053530
description aspartate semialdehyde dehydrogenase, putative (EC:1.2.1.11)
nr
ID XP_012072319.1
description PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
swissprot
ID Q55512
description Aspartate-semialdehyde dehydrogenase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=asd PE=3 SV=2
trembl
ID A0A067KPI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04769 PE=3 SV=1
Gene Ontology
ID GO:0005737
description aspartate-semialdehyde dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164255_010 0.0 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
2 Hb_010068_100 0.2155964109 - - PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Jatropha curcas]
3 Hb_001269_290 0.2175136093 - - PREDICTED: uncharacterized protein LOC103438859 [Malus domestica]
4 Hb_074836_010 0.2294400425 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001545_050 0.2305330688 - - PREDICTED: ras-related protein Rab7 [Nicotiana sylvestris]
6 Hb_082407_010 0.2490481315 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
7 Hb_000926_230 0.2539623231 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008667_040 0.2543834607 - - glycerol-3-phosphate transporter family protein [Populus trichocarpa]
9 Hb_000584_020 0.2633280538 - - hypothetical protein PHAVU_002G233500g, partial [Phaseolus vulgaris]
10 Hb_006541_090 0.2647193957 - - hypothetical protein VITISV_020777 [Vitis vinifera]
11 Hb_000028_060 0.2658697999 - - -
12 Hb_009620_090 0.26714981 - - hypothetical protein L484_000980 [Morus notabilis]
13 Hb_001357_100 0.2703356434 - - PREDICTED: small ubiquitin-related modifier 1 [Jatropha curcas]
14 Hb_000184_210 0.2707782624 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
15 Hb_001005_160 0.2730517484 - - conserved hypothetical protein [Ricinus communis]
16 Hb_011942_010 0.2736595991 - - conserved hypothetical protein [Ricinus communis]
17 Hb_163599_010 0.2751173464 - - hypothetical protein RCOM_1579620 [Ricinus communis]
18 Hb_000123_270 0.2789680234 - - conserved hypothetical protein [Ricinus communis]
19 Hb_178227_010 0.2799882 - - Mitochondrial import inner membrane translocase subunit Tim13, putative [Ricinus communis]
20 Hb_013492_010 0.2805546186 - - PREDICTED: uncharacterized protein LOC105640364 [Jatropha curcas]

Gene co-expression network

sample Hb_164255_010 Hb_164255_010 Hb_010068_100 Hb_010068_100 Hb_164255_010--Hb_010068_100 Hb_001269_290 Hb_001269_290 Hb_164255_010--Hb_001269_290 Hb_074836_010 Hb_074836_010 Hb_164255_010--Hb_074836_010 Hb_001545_050 Hb_001545_050 Hb_164255_010--Hb_001545_050 Hb_082407_010 Hb_082407_010 Hb_164255_010--Hb_082407_010 Hb_000926_230 Hb_000926_230 Hb_164255_010--Hb_000926_230 Hb_000253_030 Hb_000253_030 Hb_010068_100--Hb_000253_030 Hb_136765_010 Hb_136765_010 Hb_010068_100--Hb_136765_010 Hb_068922_010 Hb_068922_010 Hb_010068_100--Hb_068922_010 Hb_006541_090 Hb_006541_090 Hb_010068_100--Hb_006541_090 Hb_010068_100--Hb_082407_010 Hb_008667_040 Hb_008667_040 Hb_010068_100--Hb_008667_040 Hb_006907_100 Hb_006907_100 Hb_001269_290--Hb_006907_100 Hb_005928_050 Hb_005928_050 Hb_001269_290--Hb_005928_050 Hb_155541_010 Hb_155541_010 Hb_001269_290--Hb_155541_010 Hb_012379_010 Hb_012379_010 Hb_001269_290--Hb_012379_010 Hb_001269_290--Hb_074836_010 Hb_074836_010--Hb_000926_230 Hb_009620_090 Hb_009620_090 Hb_074836_010--Hb_009620_090 Hb_074836_010--Hb_155541_010 Hb_074836_010--Hb_001545_050 Hb_118228_010 Hb_118228_010 Hb_074836_010--Hb_118228_010 Hb_000028_060 Hb_000028_060 Hb_001545_050--Hb_000028_060 Hb_007123_060 Hb_007123_060 Hb_001545_050--Hb_007123_060 Hb_003925_070 Hb_003925_070 Hb_001545_050--Hb_003925_070 Hb_153258_050 Hb_153258_050 Hb_001545_050--Hb_153258_050 Hb_001902_130 Hb_001902_130 Hb_001545_050--Hb_001902_130 Hb_004883_050 Hb_004883_050 Hb_001545_050--Hb_004883_050 Hb_000268_010 Hb_000268_010 Hb_082407_010--Hb_000268_010 Hb_000327_290 Hb_000327_290 Hb_082407_010--Hb_000327_290 Hb_013492_010 Hb_013492_010 Hb_082407_010--Hb_013492_010 Hb_003405_060 Hb_003405_060 Hb_082407_010--Hb_003405_060 Hb_182964_010 Hb_182964_010 Hb_082407_010--Hb_182964_010 Hb_082407_010--Hb_007123_060 Hb_000139_490 Hb_000139_490 Hb_000926_230--Hb_000139_490 Hb_000926_230--Hb_009620_090 Hb_001005_160 Hb_001005_160 Hb_000926_230--Hb_001005_160 Hb_089140_120 Hb_089140_120 Hb_000926_230--Hb_089140_120 Hb_000926_230--Hb_001545_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.38137 2.4059 9.18116 8.94097 1.7276 7.52364
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.48112 14.2723 0 0 0

CAGE analysis