Hb_164945_030

Information

Type -
Description -
Location Contig164945: 33501-34157
Sequence    

Annotation

kegg
ID rcu:RCOM_1238650
description hypothetical protein
nr
ID XP_002531891.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0X2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1238650 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164945_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_050229_010 0.1394460079 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
3 Hb_002020_010 0.1511339512 - - kinase-like protein [Corylus avellana]
4 Hb_000152_730 0.1571134035 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001213_060 0.1670922463 - - PREDICTED: uncharacterized protein LOC105646662 [Jatropha curcas]
6 Hb_000086_510 0.1713940115 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
7 Hb_085829_010 0.1718012082 - - PREDICTED: homeobox protein 2-like [Jatropha curcas]
8 Hb_000334_090 0.1739330951 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
9 Hb_110631_010 0.1749606034 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
10 Hb_000320_240 0.1750719986 - - multicopper oxidase, putative [Ricinus communis]
11 Hb_000890_120 0.1769088026 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
12 Hb_006351_040 0.1815824812 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000071_040 0.1825595931 - - hypothetical protein POPTR_0001s24580g [Populus trichocarpa]
14 Hb_000789_160 0.1848423609 - - PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat extensin-like protein 4 [Jatropha curcas]
15 Hb_001141_270 0.1874795929 - - PREDICTED: uncharacterized protein LOC105632005 [Jatropha curcas]
16 Hb_003427_030 0.1875169158 - - -
17 Hb_002304_110 0.1894831007 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
18 Hb_165110_010 0.1908648199 - - PREDICTED: kunitz-type elastase inhibitor BrEI-like [Jatropha curcas]
19 Hb_000163_170 0.1908894382 - - -
20 Hb_000207_060 0.1912484855 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]

Gene co-expression network

sample Hb_164945_030 Hb_164945_030 Hb_050229_010 Hb_050229_010 Hb_164945_030--Hb_050229_010 Hb_002020_010 Hb_002020_010 Hb_164945_030--Hb_002020_010 Hb_000152_730 Hb_000152_730 Hb_164945_030--Hb_000152_730 Hb_001213_060 Hb_001213_060 Hb_164945_030--Hb_001213_060 Hb_000086_510 Hb_000086_510 Hb_164945_030--Hb_000086_510 Hb_085829_010 Hb_085829_010 Hb_164945_030--Hb_085829_010 Hb_000163_170 Hb_000163_170 Hb_050229_010--Hb_000163_170 Hb_000789_160 Hb_000789_160 Hb_050229_010--Hb_000789_160 Hb_001856_260 Hb_001856_260 Hb_050229_010--Hb_001856_260 Hb_050229_010--Hb_002020_010 Hb_000237_060 Hb_000237_060 Hb_050229_010--Hb_000237_060 Hb_002020_010--Hb_000237_060 Hb_001091_040 Hb_001091_040 Hb_002020_010--Hb_001091_040 Hb_000086_530 Hb_000086_530 Hb_002020_010--Hb_000086_530 Hb_005144_150 Hb_005144_150 Hb_002020_010--Hb_005144_150 Hb_141096_010 Hb_141096_010 Hb_002020_010--Hb_141096_010 Hb_002020_010--Hb_001856_260 Hb_001246_080 Hb_001246_080 Hb_000152_730--Hb_001246_080 Hb_007292_060 Hb_007292_060 Hb_000152_730--Hb_007292_060 Hb_000487_130 Hb_000487_130 Hb_000152_730--Hb_000487_130 Hb_002326_090 Hb_002326_090 Hb_000152_730--Hb_002326_090 Hb_090210_010 Hb_090210_010 Hb_000152_730--Hb_090210_010 Hb_011218_010 Hb_011218_010 Hb_000152_730--Hb_011218_010 Hb_001213_060--Hb_085829_010 Hb_000334_090 Hb_000334_090 Hb_001213_060--Hb_000334_090 Hb_003427_030 Hb_003427_030 Hb_001213_060--Hb_003427_030 Hb_001213_060--Hb_000789_160 Hb_000207_060 Hb_000207_060 Hb_001213_060--Hb_000207_060 Hb_034713_010 Hb_034713_010 Hb_001213_060--Hb_034713_010 Hb_000086_510--Hb_085829_010 Hb_000086_510--Hb_000334_090 Hb_165110_010 Hb_165110_010 Hb_000086_510--Hb_165110_010 Hb_000320_240 Hb_000320_240 Hb_000086_510--Hb_000320_240 Hb_000157_020 Hb_000157_020 Hb_000086_510--Hb_000157_020 Hb_000243_340 Hb_000243_340 Hb_000086_510--Hb_000243_340 Hb_004705_060 Hb_004705_060 Hb_085829_010--Hb_004705_060 Hb_085829_010--Hb_000334_090 Hb_000017_250 Hb_000017_250 Hb_085829_010--Hb_000017_250 Hb_000853_250 Hb_000853_250 Hb_085829_010--Hb_000853_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.3892 10.4602 0.0717854 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.369431 1.22025 0.682016

CAGE analysis