Hb_165080_010

Information

Type -
Description -
Location Contig165080: 81-827
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP42289.1
description hypothetical protein JCGZ_01613 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01613 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165080_010 0.0 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
2 Hb_000450_180 0.1740051509 - - Disease resistance protein RPS5, putative [Ricinus communis]
3 Hb_027337_030 0.2060852991 - - PREDICTED: uncharacterized protein LOC104602841 [Nelumbo nucifera]
4 Hb_005016_100 0.207017944 - - -
5 Hb_061908_020 0.2183009708 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
6 Hb_004032_330 0.219221627 - - PREDICTED: calvin cycle protein CP12-3, chloroplastic [Jatropha curcas]
7 Hb_000261_320 0.2206628659 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
8 Hb_000996_130 0.2248982327 - - PREDICTED: remorin-like [Populus euphratica]
9 Hb_004604_030 0.2288957938 - - unnamed protein product [Coffea canephora]
10 Hb_062229_010 0.2302158913 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
11 Hb_001391_100 0.2345829093 - - AMP dependent ligase, putative [Ricinus communis]
12 Hb_146420_010 0.2346142941 - - alcohol dehydrogenase, putative [Ricinus communis]
13 Hb_013749_060 0.2347837696 - - PREDICTED: uncharacterized protein LOC105647762 [Jatropha curcas]
14 Hb_001971_020 0.2352346825 - - PREDICTED: alpha-dioxygenase 2 [Populus euphratica]
15 Hb_000770_010 0.2359311583 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
16 Hb_004586_400 0.2382213988 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
17 Hb_000417_410 0.2402096385 - - PREDICTED: protein STICHEL-like 3 isoform X2 [Jatropha curcas]
18 Hb_000522_010 0.2416273196 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Jatropha curcas]
19 Hb_002003_040 0.2417938131 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]
20 Hb_007850_010 0.2448968701 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]

Gene co-expression network

sample Hb_165080_010 Hb_165080_010 Hb_000450_180 Hb_000450_180 Hb_165080_010--Hb_000450_180 Hb_027337_030 Hb_027337_030 Hb_165080_010--Hb_027337_030 Hb_005016_100 Hb_005016_100 Hb_165080_010--Hb_005016_100 Hb_061908_020 Hb_061908_020 Hb_165080_010--Hb_061908_020 Hb_004032_330 Hb_004032_330 Hb_165080_010--Hb_004032_330 Hb_000261_320 Hb_000261_320 Hb_165080_010--Hb_000261_320 Hb_004648_100 Hb_004648_100 Hb_000450_180--Hb_004648_100 Hb_062229_010 Hb_062229_010 Hb_000450_180--Hb_062229_010 Hb_007253_040 Hb_007253_040 Hb_000450_180--Hb_007253_040 Hb_057079_020 Hb_057079_020 Hb_000450_180--Hb_057079_020 Hb_117840_010 Hb_117840_010 Hb_000450_180--Hb_117840_010 Hb_000544_020 Hb_000544_020 Hb_000450_180--Hb_000544_020 Hb_083242_020 Hb_083242_020 Hb_027337_030--Hb_083242_020 Hb_004605_020 Hb_004605_020 Hb_027337_030--Hb_004605_020 Hb_027337_030--Hb_061908_020 Hb_004007_230 Hb_004007_230 Hb_027337_030--Hb_004007_230 Hb_027337_030--Hb_004032_330 Hb_002110_110 Hb_002110_110 Hb_027337_030--Hb_002110_110 Hb_005016_100--Hb_004032_330 Hb_000770_010 Hb_000770_010 Hb_005016_100--Hb_000770_010 Hb_004604_030 Hb_004604_030 Hb_005016_100--Hb_004604_030 Hb_002010_070 Hb_002010_070 Hb_005016_100--Hb_002010_070 Hb_000614_190 Hb_000614_190 Hb_005016_100--Hb_000614_190 Hb_001357_360 Hb_001357_360 Hb_005016_100--Hb_001357_360 Hb_061908_020--Hb_004605_020 Hb_061908_020--Hb_062229_010 Hb_001391_100 Hb_001391_100 Hb_061908_020--Hb_001391_100 Hb_172676_010 Hb_172676_010 Hb_061908_020--Hb_172676_010 Hb_006618_020 Hb_006618_020 Hb_061908_020--Hb_006618_020 Hb_004032_330--Hb_000770_010 Hb_021409_120 Hb_021409_120 Hb_004032_330--Hb_021409_120 Hb_004032_330--Hb_004604_030 Hb_003077_140 Hb_003077_140 Hb_004032_330--Hb_003077_140 Hb_002003_040 Hb_002003_040 Hb_000261_320--Hb_002003_040 Hb_002833_020 Hb_002833_020 Hb_000261_320--Hb_002833_020 Hb_005880_010 Hb_005880_010 Hb_000261_320--Hb_005880_010 Hb_000261_320--Hb_001391_100 Hb_073973_020 Hb_073973_020 Hb_000261_320--Hb_073973_020 Hb_001268_300 Hb_001268_300 Hb_000261_320--Hb_001268_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.329855 0.0726721 0.147678 0 0.0807468
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0739905 0 0 0.21245 0.231867

CAGE analysis