Hb_166257_010

Information

Type -
Description -
Location Contig166257: 3515-3823
Sequence    

Annotation

kegg
ID rcu:RCOM_0993060
description hypothetical protein
nr
ID KDP21337.1
description hypothetical protein JCGZ_21808 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JC12
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21808 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_166257_010 0.0 - - hypothetical protein JCGZ_21808 [Jatropha curcas]
2 Hb_009297_010 0.0808699493 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
3 Hb_124207_010 0.0941021396 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_012553_010 0.0943665823 - - hypothetical protein JCGZ_10552 [Jatropha curcas]
5 Hb_000101_060 0.1009502334 - - -
6 Hb_000291_020 0.1011920119 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
7 Hb_001268_070 0.1142226447 - - conserved hypothetical protein [Ricinus communis]
8 Hb_015912_010 0.1216392009 - - cytochrome P450, putative [Ricinus communis]
9 Hb_012702_020 0.1231225471 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
10 Hb_000070_140 0.1323192156 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
11 Hb_002787_100 0.1356518541 - - PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
12 Hb_003636_010 0.142234473 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
13 Hb_012268_010 0.1435990301 - - glutamic acid-rich protein [Manihot esculenta]
14 Hb_008062_020 0.1520073957 - - PREDICTED: periaxin-like [Populus euphratica]
15 Hb_003117_060 0.1528330976 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
16 Hb_003752_130 0.1589523808 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
17 Hb_000535_030 0.166039401 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
18 Hb_000035_300 0.1691291551 - - conserved hypothetical protein [Ricinus communis]
19 Hb_032651_060 0.1776604736 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_007666_040 0.1779084252 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_166257_010 Hb_166257_010 Hb_009297_010 Hb_009297_010 Hb_166257_010--Hb_009297_010 Hb_124207_010 Hb_124207_010 Hb_166257_010--Hb_124207_010 Hb_012553_010 Hb_012553_010 Hb_166257_010--Hb_012553_010 Hb_000101_060 Hb_000101_060 Hb_166257_010--Hb_000101_060 Hb_000291_020 Hb_000291_020 Hb_166257_010--Hb_000291_020 Hb_001268_070 Hb_001268_070 Hb_166257_010--Hb_001268_070 Hb_008062_020 Hb_008062_020 Hb_009297_010--Hb_008062_020 Hb_049562_010 Hb_049562_010 Hb_009297_010--Hb_049562_010 Hb_000238_010 Hb_000238_010 Hb_009297_010--Hb_000238_010 Hb_002154_090 Hb_002154_090 Hb_009297_010--Hb_002154_090 Hb_154646_010 Hb_154646_010 Hb_009297_010--Hb_154646_010 Hb_124207_010--Hb_000291_020 Hb_124207_010--Hb_012553_010 Hb_002787_100 Hb_002787_100 Hb_124207_010--Hb_002787_100 Hb_000523_060 Hb_000523_060 Hb_124207_010--Hb_000523_060 Hb_124207_010--Hb_001268_070 Hb_012553_010--Hb_001268_070 Hb_012553_010--Hb_000291_020 Hb_000070_140 Hb_000070_140 Hb_012553_010--Hb_000070_140 Hb_012553_010--Hb_002787_100 Hb_012702_020 Hb_012702_020 Hb_000101_060--Hb_012702_020 Hb_015912_010 Hb_015912_010 Hb_000101_060--Hb_015912_010 Hb_003752_130 Hb_003752_130 Hb_000101_060--Hb_003752_130 Hb_000101_060--Hb_009297_010 Hb_002553_080 Hb_002553_080 Hb_000101_060--Hb_002553_080 Hb_000291_020--Hb_002787_100 Hb_000291_020--Hb_000523_060 Hb_002481_070 Hb_002481_070 Hb_000291_020--Hb_002481_070 Hb_002648_020 Hb_002648_020 Hb_001268_070--Hb_002648_020 Hb_001268_070--Hb_000070_140 Hb_001268_070--Hb_009297_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.30776 0.132675 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.632183 0

CAGE analysis