Hb_166548_010

Information

Type -
Description -
Location Contig166548: 36-209
Sequence    

Annotation

kegg
ID tcc:TCM_011953
description Uncharacterized protein isoform 1
nr
ID KDP45432.1
description hypothetical protein JCGZ_09681 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAJ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09681 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_166548_010 0.0 - - hypothetical protein JCGZ_09681 [Jatropha curcas]
2 Hb_001095_060 0.2189442518 - - Uncharacterized protein TCM_012505 [Theobroma cacao]
3 Hb_036285_010 0.2213225439 - - -
4 Hb_061581_010 0.2251030054 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
5 Hb_021888_110 0.2326244937 - - -
6 Hb_001981_080 0.239882975 - - PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X4 [Musa acuminata subsp. malaccensis]
7 Hb_121236_010 0.2475330484 - - geranyl-diphosphate synthase [Hevea brasiliensis]
8 Hb_068946_010 0.2583109546 - - hypothetical protein CICLE_v100122621mg, partial [Citrus clementina]
9 Hb_115919_010 0.2600496569 - - unknown [Lotus japonicus]
10 Hb_116681_010 0.2658147606 - - hypothetical protein PRUPE_ppa025968mg, partial [Prunus persica]
11 Hb_144101_010 0.2661052325 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
12 Hb_135403_010 0.2666335971 - - HEV1.1 [Hevea brasiliensis]
13 Hb_072775_010 0.2722864901 - - 60S ribosomal L37-3 -like protein [Gossypium arboreum]
14 Hb_002205_200 0.282097029 - - PREDICTED: uncharacterized protein LOC105649174 [Jatropha curcas]
15 Hb_001662_160 0.2854176719 - - hypothetical protein PRUPE_ppa021315mg [Prunus persica]
16 Hb_002365_010 0.2861767796 - - hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
17 Hb_174107_010 0.2886014636 - - PREDICTED: uncharacterized protein LOC105775323 [Gossypium raimondii]
18 Hb_073559_010 0.2920333939 - - PREDICTED: probable beta-1,3-galactosyltransferase 12 [Jatropha curcas]
19 Hb_001544_020 0.2925544421 - - -
20 Hb_001488_110 0.2935700708 - - -

Gene co-expression network

sample Hb_166548_010 Hb_166548_010 Hb_001095_060 Hb_001095_060 Hb_166548_010--Hb_001095_060 Hb_036285_010 Hb_036285_010 Hb_166548_010--Hb_036285_010 Hb_061581_010 Hb_061581_010 Hb_166548_010--Hb_061581_010 Hb_021888_110 Hb_021888_110 Hb_166548_010--Hb_021888_110 Hb_001981_080 Hb_001981_080 Hb_166548_010--Hb_001981_080 Hb_121236_010 Hb_121236_010 Hb_166548_010--Hb_121236_010 Hb_001095_060--Hb_121236_010 Hb_115919_010 Hb_115919_010 Hb_001095_060--Hb_115919_010 Hb_027445_060 Hb_027445_060 Hb_001095_060--Hb_027445_060 Hb_068946_010 Hb_068946_010 Hb_001095_060--Hb_068946_010 Hb_001095_060--Hb_061581_010 Hb_001488_110 Hb_001488_110 Hb_001095_060--Hb_001488_110 Hb_002205_200 Hb_002205_200 Hb_036285_010--Hb_002205_200 Hb_010588_010 Hb_010588_010 Hb_036285_010--Hb_010588_010 Hb_174107_010 Hb_174107_010 Hb_036285_010--Hb_174107_010 Hb_036285_010--Hb_001981_080 Hb_036285_010--Hb_021888_110 Hb_061581_010--Hb_121236_010 Hb_135403_010 Hb_135403_010 Hb_061581_010--Hb_135403_010 Hb_061581_010--Hb_115919_010 Hb_032531_060 Hb_032531_060 Hb_061581_010--Hb_032531_060 Hb_034579_010 Hb_034579_010 Hb_061581_010--Hb_034579_010 Hb_126112_010 Hb_126112_010 Hb_021888_110--Hb_126112_010 Hb_021888_110--Hb_115919_010 Hb_000025_100 Hb_000025_100 Hb_021888_110--Hb_000025_100 Hb_021888_110--Hb_001095_060 Hb_144101_010 Hb_144101_010 Hb_021888_110--Hb_144101_010 Hb_021888_110--Hb_121236_010 Hb_126398_010 Hb_126398_010 Hb_001981_080--Hb_126398_010 Hb_145827_010 Hb_145827_010 Hb_001981_080--Hb_145827_010 Hb_001544_020 Hb_001544_020 Hb_001981_080--Hb_001544_020 Hb_003702_050 Hb_003702_050 Hb_001981_080--Hb_003702_050 Hb_000003_690 Hb_000003_690 Hb_001981_080--Hb_000003_690 Hb_121236_010--Hb_115919_010 Hb_121236_010--Hb_027445_060 Hb_005305_060 Hb_005305_060 Hb_121236_010--Hb_005305_060 Hb_121236_010--Hb_135403_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.67506 0 0 0 0 35.8465
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.14947 7.63832 2.66024 1.09383 0

CAGE analysis