Hb_166574_010

Information

Type -
Description -
Location Contig166574: 1444-3850
Sequence    

Annotation

kegg
ID tcc:TCM_007062
description Longevity assurance factor, putative
nr
ID XP_012066874.1
description PREDICTED: LAG1 longevity assurance homolog 2 [Jatropha curcas]
swissprot
ID Q9LJK3
description LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1
trembl
ID A0A067LDZ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01603 PE=4 SV=1
Gene Ontology
ID GO:0005783
description lag1 longevity assurance homolog 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_166574_010 0.0 - - PREDICTED: LAG1 longevity assurance homolog 2 [Jatropha curcas]
2 Hb_000127_140 0.0939952609 - - transporter-related family protein [Populus trichocarpa]
3 Hb_008147_090 0.0960868517 - - conserved hypothetical protein [Ricinus communis]
4 Hb_007894_010 0.0972480677 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]
5 Hb_001865_090 0.1050111088 - - hypothetical protein VITISV_005773 [Vitis vinifera]
6 Hb_010368_050 0.1106955134 - - PREDICTED: uncharacterized protein C1450.15 [Jatropha curcas]
7 Hb_000181_350 0.1132876736 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
8 Hb_003244_020 0.1191570194 - - PREDICTED: serine carboxypeptidase-like 27 [Jatropha curcas]
9 Hb_002184_090 0.1206610304 - - DNA binding protein, putative [Ricinus communis]
10 Hb_000029_070 0.1231448738 - - PREDICTED: cold-inducible RNA-binding protein B-like [Jatropha curcas]
11 Hb_083380_020 0.1267437513 - - PREDICTED: LAG1 longevity assurance homolog 2 [Jatropha curcas]
12 Hb_019181_030 0.1305183128 - - PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6-like [Pyrus x bretschneideri]
13 Hb_000136_100 0.1306434262 - - PREDICTED: syntaxin-61 [Jatropha curcas]
14 Hb_000120_770 0.1319218621 - - conserved hypothetical protein [Ricinus communis]
15 Hb_010407_140 0.1337210825 - - PREDICTED: malate dehydrogenase [Jatropha curcas]
16 Hb_001951_130 0.1349613699 - - PREDICTED: coatomer subunit zeta-1-like [Jatropha curcas]
17 Hb_001663_040 0.1353769438 - - hypothetical protein B456_007G162000 [Gossypium raimondii]
18 Hb_000768_210 0.1359864564 - - PREDICTED: uncharacterized protein LOC105632522 [Jatropha curcas]
19 Hb_013394_050 0.1365231487 - - PREDICTED: somatic embryogenesis receptor kinase 2 [Nicotiana sylvestris]
20 Hb_002392_010 0.1367343504 - - PREDICTED: apurinic endonuclease-redox protein isoform X4 [Jatropha curcas]

Gene co-expression network

sample Hb_166574_010 Hb_166574_010 Hb_000127_140 Hb_000127_140 Hb_166574_010--Hb_000127_140 Hb_008147_090 Hb_008147_090 Hb_166574_010--Hb_008147_090 Hb_007894_010 Hb_007894_010 Hb_166574_010--Hb_007894_010 Hb_001865_090 Hb_001865_090 Hb_166574_010--Hb_001865_090 Hb_010368_050 Hb_010368_050 Hb_166574_010--Hb_010368_050 Hb_000181_350 Hb_000181_350 Hb_166574_010--Hb_000181_350 Hb_000127_140--Hb_007894_010 Hb_000127_140--Hb_008147_090 Hb_001951_130 Hb_001951_130 Hb_000127_140--Hb_001951_130 Hb_001195_060 Hb_001195_060 Hb_000127_140--Hb_001195_060 Hb_000666_100 Hb_000666_100 Hb_000127_140--Hb_000666_100 Hb_002184_090 Hb_002184_090 Hb_000127_140--Hb_002184_090 Hb_180343_010 Hb_180343_010 Hb_008147_090--Hb_180343_010 Hb_000029_070 Hb_000029_070 Hb_008147_090--Hb_000029_070 Hb_002392_010 Hb_002392_010 Hb_008147_090--Hb_002392_010 Hb_008147_090--Hb_001195_060 Hb_008147_090--Hb_002184_090 Hb_010407_140 Hb_010407_140 Hb_007894_010--Hb_010407_140 Hb_005701_120 Hb_005701_120 Hb_007894_010--Hb_005701_120 Hb_000197_020 Hb_000197_020 Hb_007894_010--Hb_000197_020 Hb_000136_100 Hb_000136_100 Hb_007894_010--Hb_000136_100 Hb_001957_010 Hb_001957_010 Hb_007894_010--Hb_001957_010 Hb_001865_090--Hb_000029_070 Hb_001865_090--Hb_008147_090 Hb_001754_080 Hb_001754_080 Hb_001865_090--Hb_001754_080 Hb_000120_770 Hb_000120_770 Hb_001865_090--Hb_000120_770 Hb_001489_110 Hb_001489_110 Hb_001865_090--Hb_001489_110 Hb_010368_050--Hb_001951_130 Hb_010368_050--Hb_000127_140 Hb_019181_030 Hb_019181_030 Hb_010368_050--Hb_019181_030 Hb_010368_050--Hb_010407_140 Hb_000392_340 Hb_000392_340 Hb_010368_050--Hb_000392_340 Hb_083380_020 Hb_083380_020 Hb_010368_050--Hb_083380_020 Hb_001663_040 Hb_001663_040 Hb_000181_350--Hb_001663_040 Hb_007101_110 Hb_007101_110 Hb_000181_350--Hb_007101_110 Hb_000057_110 Hb_000057_110 Hb_000181_350--Hb_000057_110 Hb_000200_300 Hb_000200_300 Hb_000181_350--Hb_000200_300 Hb_000684_030 Hb_000684_030 Hb_000181_350--Hb_000684_030 Hb_000062_330 Hb_000062_330 Hb_000181_350--Hb_000062_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.263027 0.239053 1.81023 3.32162 0.790328 1.37001
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27869 1.73547 1.41657 1.09299 1.56545

CAGE analysis