Hb_167364_020

Information

Type -
Description -
Location Contig167364: 15564-17091
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167364_020 0.0 - - -
2 Hb_005743_090 0.2180616237 - - -
3 Hb_000513_080 0.3015549167 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Jatropha curcas]
4 Hb_000866_360 0.3018807184 - - -
5 Hb_004522_020 0.3037043264 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
6 Hb_000189_060 0.309536539 - - PREDICTED: uncharacterized protein LOC105637477 [Jatropha curcas]
7 Hb_000516_070 0.3095682871 - - -
8 Hb_001519_070 0.3333504448 - - hypothetical protein JCGZ_09841 [Jatropha curcas]
9 Hb_004230_030 0.3499706917 - - hypothetical protein CISIN_1g043871mg [Citrus sinensis]
10 Hb_007140_010 0.3623803668 - - -
11 Hb_172179_010 0.3625136626 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
12 Hb_071379_010 0.3807725111 - - PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Nelumbo nucifera]
13 Hb_184770_010 0.3854082885 - - -
14 Hb_001329_170 0.390658061 - - Chlorophyll a-b binding protein, chloroplastic [Aegilops tauschii]
15 Hb_005779_070 0.3919591928 - - -
16 Hb_005952_020 0.3932892359 - - -
17 Hb_087008_010 0.3952332715 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
18 Hb_010589_100 0.3960718342 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
19 Hb_000088_210 0.3961082169 - - hypothetical protein POPTR_0013s11310g [Populus trichocarpa]
20 Hb_004640_040 0.3963714304 - - -

Gene co-expression network

sample Hb_167364_020 Hb_167364_020 Hb_005743_090 Hb_005743_090 Hb_167364_020--Hb_005743_090 Hb_000513_080 Hb_000513_080 Hb_167364_020--Hb_000513_080 Hb_000866_360 Hb_000866_360 Hb_167364_020--Hb_000866_360 Hb_004522_020 Hb_004522_020 Hb_167364_020--Hb_004522_020 Hb_000189_060 Hb_000189_060 Hb_167364_020--Hb_000189_060 Hb_000516_070 Hb_000516_070 Hb_167364_020--Hb_000516_070 Hb_005743_090--Hb_000866_360 Hb_005743_090--Hb_000189_060 Hb_109358_010 Hb_109358_010 Hb_005743_090--Hb_109358_010 Hb_000111_410 Hb_000111_410 Hb_005743_090--Hb_000111_410 Hb_005743_090--Hb_000513_080 Hb_000513_080--Hb_000189_060 Hb_087008_010 Hb_087008_010 Hb_000513_080--Hb_087008_010 Hb_004640_040 Hb_004640_040 Hb_000513_080--Hb_004640_040 Hb_134312_010 Hb_134312_010 Hb_000513_080--Hb_134312_010 Hb_071379_010 Hb_071379_010 Hb_000513_080--Hb_071379_010 Hb_000123_100 Hb_000123_100 Hb_000513_080--Hb_000123_100 Hb_000866_360--Hb_109358_010 Hb_000866_360--Hb_000111_410 Hb_000866_360--Hb_000189_060 Hb_023226_050 Hb_023226_050 Hb_000866_360--Hb_023226_050 Hb_004522_020--Hb_000516_070 Hb_000003_140 Hb_000003_140 Hb_004522_020--Hb_000003_140 Hb_004522_020--Hb_005743_090 Hb_001623_310 Hb_001623_310 Hb_004522_020--Hb_001623_310 Hb_001329_170 Hb_001329_170 Hb_004522_020--Hb_001329_170 Hb_000189_060--Hb_004640_040 Hb_000189_060--Hb_134312_010 Hb_000189_060--Hb_087008_010 Hb_000189_060--Hb_071379_010 Hb_000696_020 Hb_000696_020 Hb_000516_070--Hb_000696_020 Hb_002631_220 Hb_002631_220 Hb_000516_070--Hb_002631_220 Hb_000861_010 Hb_000861_010 Hb_000516_070--Hb_000861_010 Hb_000832_330 Hb_000832_330 Hb_000516_070--Hb_000832_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.263971 0 0.317954 0 0.156313 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.148661 0 0 0

CAGE analysis