Hb_167711_040

Information

Type -
Description -
Location Contig167711: 23938-30115
Sequence    

Annotation

kegg
ID rcu:RCOM_1683030
description Cucumisin precursor, putative (EC:3.4.21.25)
nr
ID XP_012087249.1
description PREDICTED: cucumisin-like [Jatropha curcas]
swissprot
ID Q39547
description Cucumisin OS=Cucumis melo PE=1 SV=1
trembl
ID A0A067K1K2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20815 PE=4 SV=1
Gene Ontology
ID GO:0004252
description cucumisin-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167711_040 0.0 - - PREDICTED: cucumisin-like [Jatropha curcas]
2 Hb_000756_020 0.0957088526 - - BnaA05g19440D [Brassica napus]
3 Hb_002725_060 0.1052480925 - - PREDICTED: uncharacterized protein LOC105644961 [Jatropha curcas]
4 Hb_004994_110 0.1083361769 - - -
5 Hb_163268_010 0.1330643849 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
6 Hb_001741_130 0.1332286392 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]
7 Hb_008505_020 0.1521580448 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
8 Hb_033835_020 0.1532010779 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_005531_010 0.16045299 - - hypothetical protein CICLE_v10033008mg [Citrus clementina]
10 Hb_002240_040 0.1870699937 - - -
11 Hb_000249_120 0.1908869007 - - PREDICTED: uncharacterized protein LOC104613364 [Nelumbo nucifera]
12 Hb_000703_050 0.226433891 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001146_060 0.2294379667 transcription factor TF Family: bHLH lMYC5 [Hevea brasiliensis]
14 Hb_000892_070 0.2415061238 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]
15 Hb_003786_090 0.2434377928 - - hypothetical protein JCGZ_19199 [Jatropha curcas]
16 Hb_001369_210 0.2680244134 transcription factor TF Family: C2H2 hypothetical protein JCGZ_26269 [Jatropha curcas]
17 Hb_002588_040 0.2698309284 - - Pathogenesis-related protein 1 [Theobroma cacao]
18 Hb_039229_010 0.2701911958 - - -
19 Hb_000563_260 0.2719034914 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
20 Hb_001348_230 0.2725012669 transcription factor TF Family: TRAF protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_167711_040 Hb_167711_040 Hb_000756_020 Hb_000756_020 Hb_167711_040--Hb_000756_020 Hb_002725_060 Hb_002725_060 Hb_167711_040--Hb_002725_060 Hb_004994_110 Hb_004994_110 Hb_167711_040--Hb_004994_110 Hb_163268_010 Hb_163268_010 Hb_167711_040--Hb_163268_010 Hb_001741_130 Hb_001741_130 Hb_167711_040--Hb_001741_130 Hb_008505_020 Hb_008505_020 Hb_167711_040--Hb_008505_020 Hb_000756_020--Hb_163268_010 Hb_000756_020--Hb_001741_130 Hb_000756_020--Hb_008505_020 Hb_033835_020 Hb_033835_020 Hb_000756_020--Hb_033835_020 Hb_005531_010 Hb_005531_010 Hb_000756_020--Hb_005531_010 Hb_002240_040 Hb_002240_040 Hb_000756_020--Hb_002240_040 Hb_002725_060--Hb_004994_110 Hb_000703_050 Hb_000703_050 Hb_002725_060--Hb_000703_050 Hb_001146_060 Hb_001146_060 Hb_002725_060--Hb_001146_060 Hb_001247_330 Hb_001247_330 Hb_002725_060--Hb_001247_330 Hb_002725_060--Hb_000756_020 Hb_004994_110--Hb_000703_050 Hb_004994_110--Hb_001247_330 Hb_004994_110--Hb_001146_060 Hb_004994_110--Hb_000756_020 Hb_163268_010--Hb_001741_130 Hb_163268_010--Hb_008505_020 Hb_163268_010--Hb_033835_020 Hb_163268_010--Hb_005531_010 Hb_163268_010--Hb_002240_040 Hb_001741_130--Hb_008505_020 Hb_001741_130--Hb_033835_020 Hb_001741_130--Hb_005531_010 Hb_001741_130--Hb_002240_040 Hb_008505_020--Hb_033835_020 Hb_008505_020--Hb_005531_010 Hb_008505_020--Hb_002240_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0772148 0.0711803 0 0

CAGE analysis