Hb_168440_010

Information

Type -
Description -
Location Contig168440: 4844-5770
Sequence    

Annotation

kegg
ID tcc:TCM_034114
description Peroxidase superfamily protein
nr
ID XP_012071934.1
description PREDICTED: peroxidase 9 [Jatropha curcas]
swissprot
ID Q96512
description Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1
trembl
ID A0A061FD72
description Peroxidase OS=Theobroma cacao GN=TCM_034114 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168440_010 0.0 - - PREDICTED: peroxidase 9 [Jatropha curcas]
2 Hb_000431_150 0.1675094001 - - ribosomal protein L27, putative [Ricinus communis]
3 Hb_000312_070 0.1824011443 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001519_170 0.1901840155 - - PREDICTED: K(+) efflux antiporter 3, chloroplastic [Jatropha curcas]
5 Hb_140360_010 0.1929719033 - - PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Populus euphratica]
6 Hb_000189_150 0.2047613926 transcription factor TF Family: bZIP PREDICTED: light-inducible protein CPRF2 [Jatropha curcas]
7 Hb_000152_180 0.2118062006 - - PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Jatropha curcas]
8 Hb_002400_170 0.212042553 - - PREDICTED: adenine phosphoribosyltransferase 5 [Jatropha curcas]
9 Hb_001711_060 0.2144383354 - - PREDICTED: ferredoxin isoform X1 [Jatropha curcas]
10 Hb_089889_010 0.2168157184 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
11 Hb_001366_350 0.2257276467 - - PREDICTED: peptidyl-prolyl cis-trans isomerase isoform X2 [Jatropha curcas]
12 Hb_001975_130 0.2262971653 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 6 isoform X1 [Populus euphratica]
13 Hb_007217_010 0.2275806554 - - PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic [Jatropha curcas]
14 Hb_000392_450 0.2291116907 - - PREDICTED: isochorismate synthase 2, chloroplastic [Jatropha curcas]
15 Hb_004517_030 0.2324019065 - - conserved hypothetical protein [Ricinus communis]
16 Hb_015967_030 0.2335391011 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription repressor VAL1 isoform X1 [Jatropha curcas]
17 Hb_002435_090 0.2347468107 - - PREDICTED: membrane-associated 30 kDa protein, chloroplastic [Jatropha curcas]
18 Hb_001386_090 0.2362991602 - - PREDICTED: uncharacterized protein LOC105632529 [Jatropha curcas]
19 Hb_003992_050 0.2370449671 - - delta 9 desaturase, putative [Ricinus communis]
20 Hb_009771_060 0.2390619902 - - PREDICTED: 30S ribosomal protein S31, chloroplastic [Populus euphratica]

Gene co-expression network

sample Hb_168440_010 Hb_168440_010 Hb_000431_150 Hb_000431_150 Hb_168440_010--Hb_000431_150 Hb_000312_070 Hb_000312_070 Hb_168440_010--Hb_000312_070 Hb_001519_170 Hb_001519_170 Hb_168440_010--Hb_001519_170 Hb_140360_010 Hb_140360_010 Hb_168440_010--Hb_140360_010 Hb_000189_150 Hb_000189_150 Hb_168440_010--Hb_000189_150 Hb_000152_180 Hb_000152_180 Hb_168440_010--Hb_000152_180 Hb_000431_150--Hb_000189_150 Hb_021576_080 Hb_021576_080 Hb_000431_150--Hb_021576_080 Hb_001711_060 Hb_001711_060 Hb_000431_150--Hb_001711_060 Hb_000431_150--Hb_001519_170 Hb_000431_150--Hb_000152_180 Hb_023732_050 Hb_023732_050 Hb_000431_150--Hb_023732_050 Hb_000312_070--Hb_000152_180 Hb_017193_010 Hb_017193_010 Hb_000312_070--Hb_017193_010 Hb_009771_060 Hb_009771_060 Hb_000312_070--Hb_009771_060 Hb_000392_450 Hb_000392_450 Hb_000312_070--Hb_000392_450 Hb_001102_050 Hb_001102_050 Hb_000312_070--Hb_001102_050 Hb_007263_010 Hb_007263_010 Hb_000312_070--Hb_007263_010 Hb_001519_170--Hb_001711_060 Hb_001519_170--Hb_140360_010 Hb_000146_030 Hb_000146_030 Hb_001519_170--Hb_000146_030 Hb_000000_180 Hb_000000_180 Hb_001519_170--Hb_000000_180 Hb_001366_350 Hb_001366_350 Hb_001519_170--Hb_001366_350 Hb_001386_090 Hb_001386_090 Hb_001519_170--Hb_001386_090 Hb_002435_090 Hb_002435_090 Hb_140360_010--Hb_002435_090 Hb_000574_470 Hb_000574_470 Hb_140360_010--Hb_000574_470 Hb_172632_060 Hb_172632_060 Hb_140360_010--Hb_172632_060 Hb_140360_010--Hb_001711_060 Hb_140360_010--Hb_001366_350 Hb_000718_040 Hb_000718_040 Hb_000189_150--Hb_000718_040 Hb_000189_150--Hb_000152_180 Hb_011476_030 Hb_011476_030 Hb_000189_150--Hb_011476_030 Hb_000368_120 Hb_000368_120 Hb_000189_150--Hb_000368_120 Hb_011114_020 Hb_011114_020 Hb_000189_150--Hb_011114_020 Hb_000152_180--Hb_011476_030 Hb_005332_080 Hb_005332_080 Hb_000152_180--Hb_005332_080 Hb_000152_180--Hb_009771_060 Hb_001541_110 Hb_001541_110 Hb_000152_180--Hb_001541_110 Hb_007217_010 Hb_007217_010 Hb_000152_180--Hb_007217_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0930729 0.153496 1.66078 0.0765705 0.0842208 0.0252678
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0657417 0.413551 0.281029 0.167277 0.519858

CAGE analysis