Hb_168978_030

Information

Type -
Description -
Location Contig168978: 36846-42322
Sequence    

Annotation

kegg
ID rcu:RCOM_0482340
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012068077.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
swissprot
ID Q9STV4
description CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1
trembl
ID A0A067KZB3
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_15929 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cbl-interacting serine threonine-protein kinase 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168978_030 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
2 Hb_000640_170 0.0465790914 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
3 Hb_000035_470 0.0558155569 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
4 Hb_000617_180 0.0595934659 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
5 Hb_105328_020 0.0631606918 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
6 Hb_002044_150 0.0645729473 - - PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Jatropha curcas]
7 Hb_000156_010 0.065107468 - - phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus communis]
8 Hb_006153_070 0.0659635143 - - 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Jatropha curcas]
9 Hb_063716_100 0.0661843584 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X2 [Jatropha curcas]
10 Hb_009898_050 0.0669798548 - - PREDICTED: beta-taxilin [Jatropha curcas]
11 Hb_000138_100 0.0676986173 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]
12 Hb_004846_220 0.0705745185 - - PREDICTED: probable protein phosphatase 2C 11 isoform X1 [Jatropha curcas]
13 Hb_007380_060 0.0724575455 - - hypothetical protein POPTR_0006s00280g [Populus trichocarpa]
14 Hb_000830_030 0.0737317577 - - PREDICTED: uncharacterized protein LOC105644214 [Jatropha curcas]
15 Hb_026198_070 0.0737406282 - - PREDICTED: uncharacterized membrane protein At4g09580 [Jatropha curcas]
16 Hb_001442_040 0.0739496971 - - PREDICTED: peroxisome biogenesis factor 10 isoform X1 [Jatropha curcas]
17 Hb_000329_800 0.0745976652 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000111_320 0.0748749713 transcription factor TF Family: bZIP Transcription factor HBP-1b(c1), putative [Ricinus communis]
19 Hb_000915_260 0.0757585913 - - PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]
20 Hb_001040_100 0.0760799685 - - PREDICTED: general transcription factor IIH subunit 4 [Jatropha curcas]

Gene co-expression network

sample Hb_168978_030 Hb_168978_030 Hb_000640_170 Hb_000640_170 Hb_168978_030--Hb_000640_170 Hb_000035_470 Hb_000035_470 Hb_168978_030--Hb_000035_470 Hb_000617_180 Hb_000617_180 Hb_168978_030--Hb_000617_180 Hb_105328_020 Hb_105328_020 Hb_168978_030--Hb_105328_020 Hb_002044_150 Hb_002044_150 Hb_168978_030--Hb_002044_150 Hb_000156_010 Hb_000156_010 Hb_168978_030--Hb_000156_010 Hb_000640_170--Hb_000035_470 Hb_001599_040 Hb_001599_040 Hb_000640_170--Hb_001599_040 Hb_009898_050 Hb_009898_050 Hb_000640_170--Hb_009898_050 Hb_000640_170--Hb_000156_010 Hb_026198_070 Hb_026198_070 Hb_000640_170--Hb_026198_070 Hb_004319_080 Hb_004319_080 Hb_000035_470--Hb_004319_080 Hb_015807_050 Hb_015807_050 Hb_000035_470--Hb_015807_050 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_002073_190 Hb_002073_190 Hb_000035_470--Hb_002073_190 Hb_000976_140 Hb_000976_140 Hb_000035_470--Hb_000976_140 Hb_000462_060 Hb_000462_060 Hb_000617_180--Hb_000462_060 Hb_000347_070 Hb_000347_070 Hb_000617_180--Hb_000347_070 Hb_002375_010 Hb_002375_010 Hb_000617_180--Hb_002375_010 Hb_004619_030 Hb_004619_030 Hb_000617_180--Hb_004619_030 Hb_000008_290 Hb_000008_290 Hb_000617_180--Hb_000008_290 Hb_000170_090 Hb_000170_090 Hb_105328_020--Hb_000170_090 Hb_000345_380 Hb_000345_380 Hb_105328_020--Hb_000345_380 Hb_011037_030 Hb_011037_030 Hb_105328_020--Hb_011037_030 Hb_006588_170 Hb_006588_170 Hb_105328_020--Hb_006588_170 Hb_013399_020 Hb_013399_020 Hb_105328_020--Hb_013399_020 Hb_105328_020--Hb_000156_010 Hb_007479_040 Hb_007479_040 Hb_002044_150--Hb_007479_040 Hb_004254_090 Hb_004254_090 Hb_002044_150--Hb_004254_090 Hb_002044_150--Hb_026198_070 Hb_000207_050 Hb_000207_050 Hb_002044_150--Hb_000207_050 Hb_000138_100 Hb_000138_100 Hb_002044_150--Hb_000138_100 Hb_000156_010--Hb_011037_030 Hb_003750_050 Hb_003750_050 Hb_000156_010--Hb_003750_050 Hb_054865_150 Hb_054865_150 Hb_000156_010--Hb_054865_150 Hb_012498_010 Hb_012498_010 Hb_000156_010--Hb_012498_010 Hb_005291_050 Hb_005291_050 Hb_000156_010--Hb_005291_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.39668 1.46688 2.59774 2.68966 2.44588 3.59116
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.72885 2.23374 2.20136 3.45064 2.56331

CAGE analysis