Hb_169170_010

Information

Type -
Description -
Location Contig169170: 809-1173
Sequence    

Annotation

kegg
ID pxb:103934309
description protein disulfide isomerase-like 5-1
nr
ID XP_010253557.1
description PREDICTED: protein disulfide-isomerase 5-1 isoform X2 [Nelumbo nucifera]
swissprot
ID Q10N04
description Protein disulfide isomerase-like 5-1 OS=Oryza sativa subsp. japonica GN=PDIL5-1 PE=2 SV=1
trembl
ID B9SK35
description Protein disulfide isomerase, putative OS=Ricinus communis GN=RCOM_1399600 PE=4 SV=1
Gene Ontology
ID GO:0005622
description protein disulfide-isomerase 5-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169170_010 0.0 - - PREDICTED: protein disulfide-isomerase 5-1 isoform X2 [Nelumbo nucifera]
2 Hb_177103_010 0.1115330766 - - PREDICTED: histone H2AX [Elaeis guineensis]
3 Hb_068014_010 0.1186923767 - - hypothetical protein POPTR_0312s00200g, partial [Populus trichocarpa]
4 Hb_006198_090 0.1381555385 - - PREDICTED: vesicle-associated membrane protein 721-like isoform X2 [Tarenaya hassleriana]
5 Hb_005318_020 0.1464071409 - - PREDICTED: lecithin-cholesterol acyltransferase-like 4 isoform X3 [Jatropha curcas]
6 Hb_007447_020 0.1473978227 - - hypothetical protein CISIN_1g038065mg [Citrus sinensis]
7 Hb_007188_030 0.1527598322 - - PREDICTED: DNA topoisomerase 3-alpha-like [Malus domestica]
8 Hb_003656_150 0.1536913137 - - -
9 Hb_116632_010 0.1552906447 - - unnamed protein product [Vitis vinifera]
10 Hb_002960_050 0.1572896167 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
11 Hb_005679_070 0.1605194467 - - hypothetical protein M569_07741, partial [Genlisea aurea]
12 Hb_006995_010 0.1606529062 - - PREDICTED: 14 kDa zinc-binding protein [Jatropha curcas]
13 Hb_007083_020 0.1634144481 - - hypothetical protein F775_15403 [Aegilops tauschii]
14 Hb_007083_050 0.1654544127 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Nelumbo nucifera]
15 Hb_000248_030 0.1690725291 - - hypothetical protein Pmar_PMAR005331 [Perkinsus marinus ATCC 50983]
16 Hb_031866_050 0.1713584137 - - PREDICTED: uncharacterized protein LOC101756357 [Setaria italica]
17 Hb_002783_060 0.1733121281 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
18 Hb_000683_090 0.1741661403 - - stress enhanced protein [Medicago truncatula]
19 Hb_006663_090 0.17435888 - - hypothetical protein B456_010G1255001, partial [Gossypium raimondii]
20 Hb_003581_010 0.1744329192 - - hypothetical protein VITISV_004687 [Vitis vinifera]

Gene co-expression network

sample Hb_169170_010 Hb_169170_010 Hb_177103_010 Hb_177103_010 Hb_169170_010--Hb_177103_010 Hb_068014_010 Hb_068014_010 Hb_169170_010--Hb_068014_010 Hb_006198_090 Hb_006198_090 Hb_169170_010--Hb_006198_090 Hb_005318_020 Hb_005318_020 Hb_169170_010--Hb_005318_020 Hb_007447_020 Hb_007447_020 Hb_169170_010--Hb_007447_020 Hb_007188_030 Hb_007188_030 Hb_169170_010--Hb_007188_030 Hb_177103_010--Hb_007188_030 Hb_177103_010--Hb_006198_090 Hb_003656_150 Hb_003656_150 Hb_177103_010--Hb_003656_150 Hb_005679_070 Hb_005679_070 Hb_177103_010--Hb_005679_070 Hb_177103_010--Hb_068014_010 Hb_068014_010--Hb_005679_070 Hb_006663_090 Hb_006663_090 Hb_068014_010--Hb_006663_090 Hb_007083_020 Hb_007083_020 Hb_068014_010--Hb_007083_020 Hb_019053_010 Hb_019053_010 Hb_068014_010--Hb_019053_010 Hb_106415_010 Hb_106415_010 Hb_068014_010--Hb_106415_010 Hb_006198_090--Hb_003656_150 Hb_001998_140 Hb_001998_140 Hb_006198_090--Hb_001998_140 Hb_006198_090--Hb_007188_030 Hb_002482_060 Hb_002482_060 Hb_006198_090--Hb_002482_060 Hb_079978_010 Hb_079978_010 Hb_005318_020--Hb_079978_010 Hb_007083_050 Hb_007083_050 Hb_005318_020--Hb_007083_050 Hb_005318_020--Hb_007447_020 Hb_000683_090 Hb_000683_090 Hb_005318_020--Hb_000683_090 Hb_000084_130 Hb_000084_130 Hb_005318_020--Hb_000084_130 Hb_031866_050 Hb_031866_050 Hb_007447_020--Hb_031866_050 Hb_007447_020--Hb_000683_090 Hb_122567_020 Hb_122567_020 Hb_007447_020--Hb_122567_020 Hb_007447_020--Hb_079978_010 Hb_007188_030--Hb_003656_150 Hb_002815_050 Hb_002815_050 Hb_007188_030--Hb_002815_050 Hb_003030_040 Hb_003030_040 Hb_007188_030--Hb_003030_040 Hb_007188_030--Hb_005679_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.2757 10.3565 13.7487 122.478 28.0054 415.678
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.5892 41.3768 28.9902 45.759 17.6042

CAGE analysis