Hb_169329_010

Information

Type -
Description -
Location Contig169329: 404-541
Sequence    

Annotation

kegg
ID pxb:103943846
description probable ADP-ribosylation factor GTPase-activating protein AGD14
nr
ID XP_012078656.1
description PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7V7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13231 PE=4 SV=1
Gene Ontology
ID GO:0005829
description probable adp-ribosylation factor gtpase-activating protein agd14 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169329_010 0.0 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Jatropha curcas]
2 Hb_000258_360 0.1587205448 - - PREDICTED: uncharacterized protein LOC104455487 [Eucalyptus grandis]
3 Hb_059641_010 0.1725901389 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
4 Hb_177152_010 0.1739169479 - - glycosyl hydrolase family 38 family protein [Populus trichocarpa]
5 Hb_004935_080 0.1822975563 - - AT3g13060/MGH6_17 [Arabidopsis thaliana]
6 Hb_013358_100 0.1866605284 - - unknown [Medicago truncatula]
7 Hb_000136_190 0.1899180672 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
8 Hb_116638_010 0.1916686953 - - conserved hypothetical protein [Ricinus communis]
9 Hb_144550_020 0.2035691906 - - -
10 Hb_118720_010 0.2071168247 - - PREDICTED: uncharacterized protein LOC105634948 [Jatropha curcas]
11 Hb_049958_010 0.2071737513 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
12 Hb_011139_060 0.2098247946 - - -
13 Hb_100525_010 0.2118742668 - - PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
14 Hb_000179_180 0.2131561577 - - hypothetical protein EUGRSUZ_C031461, partial [Eucalyptus grandis]
15 Hb_040747_010 0.2135975429 - - hypothetical protein POPTR_0009s15120g [Populus trichocarpa]
16 Hb_134488_010 0.2138122898 - - -
17 Hb_000571_150 0.2150664638 transcription factor TF Family: GRAS transcription factor, putative [Ricinus communis]
18 Hb_025905_020 0.2153635045 - - major allergen Pru ar 1-like [Jatropha curcas]
19 Hb_145317_010 0.2186030135 - - PREDICTED: transmembrane 9 superfamily member 11 [Jatropha curcas]
20 Hb_065841_010 0.2210904419 - - hypothetical protein JCGZ_18376 [Jatropha curcas]

Gene co-expression network

sample Hb_169329_010 Hb_169329_010 Hb_000258_360 Hb_000258_360 Hb_169329_010--Hb_000258_360 Hb_059641_010 Hb_059641_010 Hb_169329_010--Hb_059641_010 Hb_177152_010 Hb_177152_010 Hb_169329_010--Hb_177152_010 Hb_004935_080 Hb_004935_080 Hb_169329_010--Hb_004935_080 Hb_013358_100 Hb_013358_100 Hb_169329_010--Hb_013358_100 Hb_000136_190 Hb_000136_190 Hb_169329_010--Hb_000136_190 Hb_011139_060 Hb_011139_060 Hb_000258_360--Hb_011139_060 Hb_000258_360--Hb_177152_010 Hb_144550_020 Hb_144550_020 Hb_000258_360--Hb_144550_020 Hb_060054_010 Hb_060054_010 Hb_000258_360--Hb_060054_010 Hb_000258_360--Hb_013358_100 Hb_049958_010 Hb_049958_010 Hb_059641_010--Hb_049958_010 Hb_000571_150 Hb_000571_150 Hb_059641_010--Hb_000571_150 Hb_003854_020 Hb_003854_020 Hb_059641_010--Hb_003854_020 Hb_059641_010--Hb_144550_020 Hb_000123_030 Hb_000123_030 Hb_059641_010--Hb_000123_030 Hb_177152_010--Hb_013358_100 Hb_145317_010 Hb_145317_010 Hb_177152_010--Hb_145317_010 Hb_035436_010 Hb_035436_010 Hb_177152_010--Hb_035436_010 Hb_065841_010 Hb_065841_010 Hb_177152_010--Hb_065841_010 Hb_178620_010 Hb_178620_010 Hb_177152_010--Hb_178620_010 Hb_070469_010 Hb_070469_010 Hb_004935_080--Hb_070469_010 Hb_002320_070 Hb_002320_070 Hb_004935_080--Hb_002320_070 Hb_000130_190 Hb_000130_190 Hb_004935_080--Hb_000130_190 Hb_003038_220 Hb_003038_220 Hb_004935_080--Hb_003038_220 Hb_004935_080--Hb_013358_100 Hb_009393_200 Hb_009393_200 Hb_004935_080--Hb_009393_200 Hb_068569_010 Hb_068569_010 Hb_013358_100--Hb_068569_010 Hb_040747_010 Hb_040747_010 Hb_013358_100--Hb_040747_010 Hb_013358_100--Hb_035436_010 Hb_013358_100--Hb_065841_010 Hb_003814_030 Hb_003814_030 Hb_000136_190--Hb_003814_030 Hb_002370_040 Hb_002370_040 Hb_000136_190--Hb_002370_040 Hb_000330_160 Hb_000330_160 Hb_000136_190--Hb_000330_160 Hb_000062_060 Hb_000062_060 Hb_000136_190--Hb_000062_060 Hb_001508_020 Hb_001508_020 Hb_000136_190--Hb_001508_020 Hb_004657_090 Hb_004657_090 Hb_000136_190--Hb_004657_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1007.05 2025.98 822.866 2523.54 965.972 3449
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
64.3857 112.528 118.797 271.01 53.3036

CAGE analysis