Hb_169383_010

Information

Type -
Description -
Location Contig169383: 59-694
Sequence    

Annotation

kegg
ID rcu:RCOM_1077240
description 4-nitrophenylphosphatase, putative (EC:3.1.3.41)
nr
ID XP_012085815.1
description PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Jatropha curcas]
swissprot
ID P0DKC4
description Phosphoglycolate phosphatase 1B, chloroplastic OS=Arabidopsis thaliana GN=PGLP1B PE=1 SV=1
trembl
ID A0A067K3S8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18073 PE=4 SV=1
Gene Ontology
ID GO:0016791
description phosphoglycolate phosphatase chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15754: 47-627
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169383_010 0.0 - - PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Jatropha curcas]
2 Hb_006472_040 0.0979758056 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
3 Hb_004096_210 0.1028276805 - - PREDICTED: uncharacterized protein LOC105638707 isoform X2 [Jatropha curcas]
4 Hb_008112_020 0.1120881347 - - PREDICTED: magnesium transporter MRS2-11, chloroplastic [Jatropha curcas]
5 Hb_001195_290 0.1126706489 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
6 Hb_019654_180 0.1222886056 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
7 Hb_000618_110 0.127478309 - - hypothetical protein POPTR_0003s09870g [Populus trichocarpa]
8 Hb_000684_400 0.1276614665 - - PREDICTED: uncharacterized protein LOC105642159 [Jatropha curcas]
9 Hb_000317_180 0.1322407236 - - PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Jatropha curcas]
10 Hb_015141_010 0.1324884611 - - gamma-tocopherol methyltransferase [Hevea brasiliensis]
11 Hb_009393_130 0.1334645835 - - PREDICTED: uncharacterized protein LOC105638053 isoform X4 [Jatropha curcas]
12 Hb_004650_050 0.1336678577 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
13 Hb_004586_270 0.1337813405 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2 isoform X2 [Jatropha curcas]
14 Hb_000190_230 0.1340305457 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
15 Hb_009838_070 0.1352606236 - - PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha curcas]
16 Hb_091433_050 0.1354928421 - - PREDICTED: uncharacterized protein LOC105646626 [Jatropha curcas]
17 Hb_022693_010 0.1389126462 - - pectin acetylesterase, putative [Ricinus communis]
18 Hb_000847_030 0.14185151 - - PREDICTED: asparagine--tRNA ligase, cytoplasmic 2 [Jatropha curcas]
19 Hb_002475_060 0.1420314329 - - PREDICTED: potassium channel SKOR-like isoform X1 [Jatropha curcas]
20 Hb_003018_150 0.1422336027 - - PREDICTED: uncharacterized protein LOC105628869 [Jatropha curcas]

Gene co-expression network

sample Hb_169383_010 Hb_169383_010 Hb_006472_040 Hb_006472_040 Hb_169383_010--Hb_006472_040 Hb_004096_210 Hb_004096_210 Hb_169383_010--Hb_004096_210 Hb_008112_020 Hb_008112_020 Hb_169383_010--Hb_008112_020 Hb_001195_290 Hb_001195_290 Hb_169383_010--Hb_001195_290 Hb_019654_180 Hb_019654_180 Hb_169383_010--Hb_019654_180 Hb_000618_110 Hb_000618_110 Hb_169383_010--Hb_000618_110 Hb_006472_040--Hb_008112_020 Hb_006472_040--Hb_001195_290 Hb_000679_320 Hb_000679_320 Hb_006472_040--Hb_000679_320 Hb_000317_180 Hb_000317_180 Hb_006472_040--Hb_000317_180 Hb_009393_140 Hb_009393_140 Hb_006472_040--Hb_009393_140 Hb_004096_210--Hb_000618_110 Hb_009838_070 Hb_009838_070 Hb_004096_210--Hb_009838_070 Hb_009393_130 Hb_009393_130 Hb_004096_210--Hb_009393_130 Hb_000327_260 Hb_000327_260 Hb_004096_210--Hb_000327_260 Hb_000866_020 Hb_000866_020 Hb_004096_210--Hb_000866_020 Hb_000816_240 Hb_000816_240 Hb_004096_210--Hb_000816_240 Hb_008112_020--Hb_001195_290 Hb_022693_010 Hb_022693_010 Hb_008112_020--Hb_022693_010 Hb_004979_050 Hb_004979_050 Hb_008112_020--Hb_004979_050 Hb_008112_020--Hb_000679_320 Hb_001517_010 Hb_001517_010 Hb_001195_290--Hb_001517_010 Hb_005210_010 Hb_005210_010 Hb_001195_290--Hb_005210_010 Hb_001268_170 Hb_001268_170 Hb_001195_290--Hb_001268_170 Hb_134949_010 Hb_134949_010 Hb_001195_290--Hb_134949_010 Hb_001729_030 Hb_001729_030 Hb_019654_180--Hb_001729_030 Hb_000190_230 Hb_000190_230 Hb_019654_180--Hb_000190_230 Hb_019654_180--Hb_009838_070 Hb_000951_150 Hb_000951_150 Hb_019654_180--Hb_000951_150 Hb_004032_280 Hb_004032_280 Hb_019654_180--Hb_004032_280 Hb_006831_090 Hb_006831_090 Hb_019654_180--Hb_006831_090 Hb_000847_030 Hb_000847_030 Hb_000618_110--Hb_000847_030 Hb_000140_460 Hb_000140_460 Hb_000618_110--Hb_000140_460 Hb_006970_030 Hb_006970_030 Hb_000618_110--Hb_006970_030 Hb_000618_110--Hb_000866_020 Hb_000618_110--Hb_009393_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.33621 4.57311 48.4114 46.8073 0.519574 2.60015
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.60929 2.10457 1.14225 2.4398 97.9874

CAGE analysis