Hb_169388_010

Information

Type -
Description -
Location Contig169388: 109-1662
Sequence    

Annotation

kegg
ID pop:POPTR_0011s14430g
description POPTRDRAFT_888988; hypothetical protein
nr
ID XP_012071403.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L2Y3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05017 PE=4 SV=1
Gene Ontology
ID GO:0016301
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169388_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_018563_040 0.1139566124 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
3 Hb_003385_090 0.1167308739 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
4 Hb_032651_060 0.1244831075 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_004619_010 0.1262856284 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_001363_010 0.1341602469 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
7 Hb_001454_160 0.1386580016 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]
8 Hb_007666_040 0.1457695547 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
9 Hb_001761_040 0.1472974737 - - PREDICTED: beta-amyrin synthase-like [Jatropha curcas]
10 Hb_002555_020 0.1504427523 - - Receptor-like protein kinase [Medicago truncatula]
11 Hb_000535_030 0.1509104316 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
12 Hb_001477_120 0.151489508 - - hypothetical protein JCGZ_25721 [Jatropha curcas]
13 Hb_151364_010 0.1516047181 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
14 Hb_003117_060 0.1522299165 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
15 Hb_004970_130 0.1566727952 - - PREDICTED: uncharacterized protein LOC105633891 [Jatropha curcas]
16 Hb_052186_010 0.1633569457 - - hypothetical protein JCGZ_17055 [Jatropha curcas]
17 Hb_001365_040 0.165030483 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Populus euphratica]
18 Hb_003469_010 0.166684439 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
19 Hb_118777_010 0.1702755018 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
20 Hb_135811_020 0.1717684235 - - hypothetical protein JCGZ_19965 [Jatropha curcas]

Gene co-expression network

sample Hb_169388_010 Hb_169388_010 Hb_018563_040 Hb_018563_040 Hb_169388_010--Hb_018563_040 Hb_003385_090 Hb_003385_090 Hb_169388_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_169388_010--Hb_032651_060 Hb_004619_010 Hb_004619_010 Hb_169388_010--Hb_004619_010 Hb_001363_010 Hb_001363_010 Hb_169388_010--Hb_001363_010 Hb_001454_160 Hb_001454_160 Hb_169388_010--Hb_001454_160 Hb_018563_040--Hb_001454_160 Hb_002555_020 Hb_002555_020 Hb_018563_040--Hb_002555_020 Hb_151364_010 Hb_151364_010 Hb_018563_040--Hb_151364_010 Hb_018563_040--Hb_003385_090 Hb_003117_060 Hb_003117_060 Hb_018563_040--Hb_003117_060 Hb_000535_030 Hb_000535_030 Hb_003385_090--Hb_000535_030 Hb_003385_090--Hb_032651_060 Hb_007666_040 Hb_007666_040 Hb_003385_090--Hb_007666_040 Hb_001080_040 Hb_001080_040 Hb_003385_090--Hb_001080_040 Hb_049562_010 Hb_049562_010 Hb_003385_090--Hb_049562_010 Hb_001114_210 Hb_001114_210 Hb_003385_090--Hb_001114_210 Hb_032651_060--Hb_000535_030 Hb_032651_060--Hb_049562_010 Hb_032651_060--Hb_001080_040 Hb_032651_060--Hb_001363_010 Hb_005649_120 Hb_005649_120 Hb_032651_060--Hb_005649_120 Hb_001761_040 Hb_001761_040 Hb_004619_010--Hb_001761_040 Hb_004619_010--Hb_007666_040 Hb_004619_010--Hb_003385_090 Hb_004619_010--Hb_032651_060 Hb_004619_010--Hb_151364_010 Hb_005396_100 Hb_005396_100 Hb_001363_010--Hb_005396_100 Hb_000977_160 Hb_000977_160 Hb_001363_010--Hb_000977_160 Hb_001363_010--Hb_000535_030 Hb_001363_010--Hb_003385_090 Hb_012268_010 Hb_012268_010 Hb_001363_010--Hb_012268_010 Hb_001454_160--Hb_002555_020 Hb_000976_060 Hb_000976_060 Hb_001454_160--Hb_000976_060 Hb_005542_110 Hb_005542_110 Hb_001454_160--Hb_005542_110 Hb_152718_010 Hb_152718_010 Hb_001454_160--Hb_152718_010 Hb_001489_030 Hb_001489_030 Hb_001454_160--Hb_001489_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.51057 0.0309958 0.0914154 0.0510453 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.38612 0.691964

CAGE analysis