Hb_169753_010

Information

Type -
Description -
Location Contig169753: 902-3256
Sequence    

Annotation

kegg
ID tcc:TCM_028769
description Serine-threonine protein kinase, plant-type, putative
nr
ID KDP29864.1
description hypothetical protein JCGZ_18439 [Jatropha curcas]
swissprot
ID Q8RWZ5
description G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1
trembl
ID A0A067KDD8
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_18439 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15773: 970-1107
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169753_010 0.0 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
2 Hb_002205_160 0.0886546911 - - chalcone isomerase [Hibiscus cannabinus]
3 Hb_010267_020 0.0892837615 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
4 Hb_007441_290 0.0940671226 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
5 Hb_006519_020 0.0949895633 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
6 Hb_004007_080 0.1007620381 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
7 Hb_004422_030 0.1021387372 - - PREDICTED: serine/threonine-protein kinase SAPK7-like [Jatropha curcas]
8 Hb_022406_010 0.105675275 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_000200_270 0.1072132543 - - PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Jatropha curcas]
10 Hb_002918_220 0.109659709 - - PREDICTED: uncharacterized protein LOC105138896 [Populus euphratica]
11 Hb_027905_040 0.1103401571 transcription factor TF Family: E2F-DP PREDICTED: E2F transcription factor-like E2FF [Jatropha curcas]
12 Hb_064396_010 0.1138243276 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_103339_010 0.1145559525 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_004459_030 0.1206900948 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
15 Hb_004650_040 0.1214389179 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105638892 [Jatropha curcas]
16 Hb_000316_070 0.1228699707 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
17 Hb_005649_050 0.1263472274 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004225_160 0.1270136237 - - PREDICTED: kiwellin-like [Jatropha curcas]
19 Hb_000032_080 0.1280435144 transcription factor TF Family: HMG transcription factor, putative [Ricinus communis]
20 Hb_000527_030 0.131097978 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]

Gene co-expression network

sample Hb_169753_010 Hb_169753_010 Hb_002205_160 Hb_002205_160 Hb_169753_010--Hb_002205_160 Hb_010267_020 Hb_010267_020 Hb_169753_010--Hb_010267_020 Hb_007441_290 Hb_007441_290 Hb_169753_010--Hb_007441_290 Hb_006519_020 Hb_006519_020 Hb_169753_010--Hb_006519_020 Hb_004007_080 Hb_004007_080 Hb_169753_010--Hb_004007_080 Hb_004422_030 Hb_004422_030 Hb_169753_010--Hb_004422_030 Hb_002205_160--Hb_007441_290 Hb_000035_150 Hb_000035_150 Hb_002205_160--Hb_000035_150 Hb_003992_130 Hb_003992_130 Hb_002205_160--Hb_003992_130 Hb_007951_020 Hb_007951_020 Hb_002205_160--Hb_007951_020 Hb_022406_010 Hb_022406_010 Hb_002205_160--Hb_022406_010 Hb_000200_270 Hb_000200_270 Hb_010267_020--Hb_000200_270 Hb_002918_220 Hb_002918_220 Hb_010267_020--Hb_002918_220 Hb_005568_140 Hb_005568_140 Hb_010267_020--Hb_005568_140 Hb_010267_020--Hb_004422_030 Hb_005695_070 Hb_005695_070 Hb_010267_020--Hb_005695_070 Hb_004650_040 Hb_004650_040 Hb_007441_290--Hb_004650_040 Hb_012753_150 Hb_012753_150 Hb_007441_290--Hb_012753_150 Hb_007441_290--Hb_010267_020 Hb_007441_290--Hb_006519_020 Hb_006519_020--Hb_022406_010 Hb_006519_020--Hb_004007_080 Hb_001606_040 Hb_001606_040 Hb_006519_020--Hb_001606_040 Hb_001040_050 Hb_001040_050 Hb_006519_020--Hb_001040_050 Hb_007681_020 Hb_007681_020 Hb_006519_020--Hb_007681_020 Hb_000527_030 Hb_000527_030 Hb_004007_080--Hb_000527_030 Hb_052530_010 Hb_052530_010 Hb_004007_080--Hb_052530_010 Hb_000816_080 Hb_000816_080 Hb_004007_080--Hb_000816_080 Hb_088118_010 Hb_088118_010 Hb_004007_080--Hb_088118_010 Hb_103339_010 Hb_103339_010 Hb_004007_080--Hb_103339_010 Hb_004422_030--Hb_002918_220 Hb_004225_160 Hb_004225_160 Hb_004422_030--Hb_004225_160 Hb_000083_280 Hb_000083_280 Hb_004422_030--Hb_000083_280 Hb_001439_240 Hb_001439_240 Hb_004422_030--Hb_001439_240 Hb_039812_010 Hb_039812_010 Hb_004422_030--Hb_039812_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.560317 6.79625 1.5219 0 0.00785226
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.324196 0.377922

CAGE analysis