Hb_169893_010

Information

Type -
Description -
Location Contig169893: 2-678
Sequence    

Annotation

kegg
ID rcu:RCOM_0169160
description hypothetical protein
nr
ID XP_012084764.1
description PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K5X4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19893 PE=4 SV=1
Gene Ontology
ID GO:0009507
description plant mxo21-9 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169893_010 0.0 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
2 Hb_008686_010 0.0721770999 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001195_550 0.0870063697 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
4 Hb_070498_010 0.0941187946 - - receptor kinase, putative [Ricinus communis]
5 Hb_002301_400 0.1051603621 - - structural constituent of cell wall, putative [Ricinus communis]
6 Hb_003750_120 0.1069561901 - - PREDICTED: uncharacterized protein LOC105112992 [Populus euphratica]
7 Hb_128196_010 0.1111649079 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005496_040 0.111416319 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]
9 Hb_001159_090 0.1118679877 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
10 Hb_006196_030 0.1140280113 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
11 Hb_000996_070 0.114585796 - - unnamed protein product [Vitis vinifera]
12 Hb_047659_010 0.1147268292 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001157_050 0.1174975722 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
14 Hb_000441_130 0.1185612795 - - PREDICTED: homeobox-leucine zipper protein HOX32 [Vitis vinifera]
15 Hb_001221_060 0.1223001701 - - PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]
16 Hb_000003_750 0.1237008285 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
17 Hb_006816_490 0.1253856898 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Jatropha curcas]
18 Hb_143629_120 0.1268853455 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
19 Hb_000120_340 0.1269519967 - - Cucumisin precursor, putative [Ricinus communis]
20 Hb_000032_420 0.1271031782 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]

Gene co-expression network

sample Hb_169893_010 Hb_169893_010 Hb_008686_010 Hb_008686_010 Hb_169893_010--Hb_008686_010 Hb_001195_550 Hb_001195_550 Hb_169893_010--Hb_001195_550 Hb_070498_010 Hb_070498_010 Hb_169893_010--Hb_070498_010 Hb_002301_400 Hb_002301_400 Hb_169893_010--Hb_002301_400 Hb_003750_120 Hb_003750_120 Hb_169893_010--Hb_003750_120 Hb_128196_010 Hb_128196_010 Hb_169893_010--Hb_128196_010 Hb_005496_040 Hb_005496_040 Hb_008686_010--Hb_005496_040 Hb_008686_010--Hb_001195_550 Hb_008686_010--Hb_070498_010 Hb_000003_750 Hb_000003_750 Hb_008686_010--Hb_000003_750 Hb_143629_120 Hb_143629_120 Hb_008686_010--Hb_143629_120 Hb_001195_550--Hb_070498_010 Hb_001195_550--Hb_002301_400 Hb_001159_090 Hb_001159_090 Hb_001195_550--Hb_001159_090 Hb_002639_050 Hb_002639_050 Hb_001195_550--Hb_002639_050 Hb_070498_010--Hb_128196_010 Hb_070498_010--Hb_002301_400 Hb_000996_030 Hb_000996_030 Hb_070498_010--Hb_000996_030 Hb_012404_020 Hb_012404_020 Hb_070498_010--Hb_012404_020 Hb_011918_070 Hb_011918_070 Hb_070498_010--Hb_011918_070 Hb_070498_010--Hb_000003_750 Hb_002301_400--Hb_128196_010 Hb_002301_400--Hb_012404_020 Hb_002301_400--Hb_001159_090 Hb_006196_030 Hb_006196_030 Hb_002301_400--Hb_006196_030 Hb_003750_120--Hb_005496_040 Hb_003750_120--Hb_000003_750 Hb_003750_120--Hb_001159_090 Hb_001007_020 Hb_001007_020 Hb_003750_120--Hb_001007_020 Hb_002045_210 Hb_002045_210 Hb_003750_120--Hb_002045_210 Hb_000418_110 Hb_000418_110 Hb_003750_120--Hb_000418_110 Hb_001157_050 Hb_001157_050 Hb_128196_010--Hb_001157_050 Hb_128196_010--Hb_012404_020 Hb_001221_060 Hb_001221_060 Hb_128196_010--Hb_001221_060 Hb_005568_020 Hb_005568_020 Hb_128196_010--Hb_005568_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.765382 21.3004 117.646 114.567 0.277725 4.92335
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.85461 1.14481 0 9.16541 40.7352

CAGE analysis