Hb_170878_060

Information

Type -
Description -
Location Contig170878: 27421-30300
Sequence    

Annotation

kegg
ID pop:POPTR_0017s13190g
description hypothetical protein
nr
ID XP_012088049.1
description PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID A0A067JNB6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25574 PE=3 SV=1
Gene Ontology
ID GO:0004674
description malectin receptor-like protein kinase family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15958: 27692-27950 , PASA_asmbl_15959: 28469-28929 , PASA_asmbl_15960: 29644-30247
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170878_060 0.0 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
2 Hb_003992_220 0.0955218867 - - s-receptor kinase, putative [Ricinus communis]
3 Hb_001607_070 0.0997511108 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
4 Hb_007676_060 0.1206576915 - - PREDICTED: cellulose synthase-like protein E2 [Pyrus x bretschneideri]
5 Hb_038833_010 0.1217893923 - - polyprotein [Ananas comosus]
6 Hb_002308_060 0.1241854569 - - PREDICTED: cytochrome P450 704C1-like [Jatropha curcas]
7 Hb_000597_080 0.1366833153 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
8 Hb_001778_040 0.1393091193 - - hypothetical protein VITISV_021035 [Vitis vinifera]
9 Hb_000169_100 0.1447651807 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
10 Hb_001963_110 0.1456066145 - - -
11 Hb_000120_880 0.1465778488 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
12 Hb_025668_020 0.1505777972 - - conserved hypothetical protein [Ricinus communis]
13 Hb_135554_010 0.1510848507 - - Insulin-degrading enzyme, putative [Ricinus communis]
14 Hb_017225_030 0.1517293409 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
15 Hb_002622_010 0.1518006617 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
16 Hb_006594_080 0.1632857261 - - beta-glucosidase, putative [Ricinus communis]
17 Hb_029727_010 0.1668045153 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_000137_060 0.1668719695 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
19 Hb_167211_010 0.1674083647 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
20 Hb_029866_110 0.1675064004 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 10-like [Jatropha curcas]

Gene co-expression network

sample Hb_170878_060 Hb_170878_060 Hb_003992_220 Hb_003992_220 Hb_170878_060--Hb_003992_220 Hb_001607_070 Hb_001607_070 Hb_170878_060--Hb_001607_070 Hb_007676_060 Hb_007676_060 Hb_170878_060--Hb_007676_060 Hb_038833_010 Hb_038833_010 Hb_170878_060--Hb_038833_010 Hb_002308_060 Hb_002308_060 Hb_170878_060--Hb_002308_060 Hb_000597_080 Hb_000597_080 Hb_170878_060--Hb_000597_080 Hb_167211_010 Hb_167211_010 Hb_003992_220--Hb_167211_010 Hb_001778_040 Hb_001778_040 Hb_003992_220--Hb_001778_040 Hb_003992_220--Hb_002308_060 Hb_001109_130 Hb_001109_130 Hb_003992_220--Hb_001109_130 Hb_001963_110 Hb_001963_110 Hb_003992_220--Hb_001963_110 Hb_002622_010 Hb_002622_010 Hb_001607_070--Hb_002622_010 Hb_001607_070--Hb_000597_080 Hb_000120_880 Hb_000120_880 Hb_001607_070--Hb_000120_880 Hb_001607_070--Hb_002308_060 Hb_001607_070--Hb_001778_040 Hb_001597_090 Hb_001597_090 Hb_007676_060--Hb_001597_090 Hb_146930_010 Hb_146930_010 Hb_007676_060--Hb_146930_010 Hb_000675_040 Hb_000675_040 Hb_007676_060--Hb_000675_040 Hb_000169_100 Hb_000169_100 Hb_007676_060--Hb_000169_100 Hb_001288_050 Hb_001288_050 Hb_007676_060--Hb_001288_050 Hb_006355_070 Hb_006355_070 Hb_038833_010--Hb_006355_070 Hb_038833_010--Hb_002308_060 Hb_028872_100 Hb_028872_100 Hb_038833_010--Hb_028872_100 Hb_158534_010 Hb_158534_010 Hb_038833_010--Hb_158534_010 Hb_001277_380 Hb_001277_380 Hb_038833_010--Hb_001277_380 Hb_002308_060--Hb_000597_080 Hb_002308_060--Hb_001963_110 Hb_092029_010 Hb_092029_010 Hb_002308_060--Hb_092029_010 Hb_000917_120 Hb_000917_120 Hb_000597_080--Hb_000917_120 Hb_009659_040 Hb_009659_040 Hb_000597_080--Hb_009659_040 Hb_008111_010 Hb_008111_010 Hb_000597_080--Hb_008111_010 Hb_006120_030 Hb_006120_030 Hb_000597_080--Hb_006120_030 Hb_000264_340 Hb_000264_340 Hb_000597_080--Hb_000264_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.23632 2.25816 8.8799 0.0201027 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0162436 0 0 18.7146 20.7385

CAGE analysis