Hb_170979_010

Information

Type -
Description -
Location Contig170979: 2477-5281
Sequence    

Annotation

kegg
ID mdm:103437839
description peroxidase 4-like
nr
ID XP_012091191.1
description PREDICTED: peroxidase 4-like [Jatropha curcas]
swissprot
ID A7NY33
description Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1
trembl
ID A0A067JFX0
description Peroxidase OS=Jatropha curcas GN=JCGZ_03354 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170979_010 0.0 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
2 Hb_092044_010 0.0731617855 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
3 Hb_009393_010 0.0986654565 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
4 Hb_000984_120 0.1023800567 - - receptor protein kinase, putative [Ricinus communis]
5 Hb_011609_060 0.1060732849 - - PREDICTED: cytokinin hydroxylase [Jatropha curcas]
6 Hb_023502_010 0.1157719066 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
7 Hb_000206_280 0.1161316276 - - Uncharacterized protein TCM_031897 [Theobroma cacao]
8 Hb_003938_150 0.1166035999 - - hypothetical protein JCGZ_17711 [Jatropha curcas]
9 Hb_007556_010 0.1168895937 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Populus euphratica]
10 Hb_070850_010 0.1170805473 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B-like [Jatropha curcas]
11 Hb_052530_030 0.1172126848 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
12 Hb_007728_010 0.1220715531 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
13 Hb_007235_040 0.1230865528 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_009230_050 0.1230969221 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
15 Hb_010028_010 0.1243302945 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
16 Hb_008296_010 0.1251189307 - - -
17 Hb_001784_010 0.1257092257 - - nutrient reservoir, putative [Ricinus communis]
18 Hb_010615_010 0.1280228364 - - PREDICTED: reticuline oxidase-like protein [Jatropha curcas]
19 Hb_000318_320 0.1294088159 - - PREDICTED: transmembrane protein 45B [Jatropha curcas]
20 Hb_000134_010 0.1303958654 - - -

Gene co-expression network

sample Hb_170979_010 Hb_170979_010 Hb_092044_010 Hb_092044_010 Hb_170979_010--Hb_092044_010 Hb_009393_010 Hb_009393_010 Hb_170979_010--Hb_009393_010 Hb_000984_120 Hb_000984_120 Hb_170979_010--Hb_000984_120 Hb_011609_060 Hb_011609_060 Hb_170979_010--Hb_011609_060 Hb_023502_010 Hb_023502_010 Hb_170979_010--Hb_023502_010 Hb_000206_280 Hb_000206_280 Hb_170979_010--Hb_000206_280 Hb_092044_010--Hb_011609_060 Hb_092044_010--Hb_000984_120 Hb_010028_010 Hb_010028_010 Hb_092044_010--Hb_010028_010 Hb_007235_040 Hb_007235_040 Hb_092044_010--Hb_007235_040 Hb_092044_010--Hb_000206_280 Hb_025477_030 Hb_025477_030 Hb_009393_010--Hb_025477_030 Hb_013726_100 Hb_013726_100 Hb_009393_010--Hb_013726_100 Hb_000256_050 Hb_000256_050 Hb_009393_010--Hb_000256_050 Hb_167802_010 Hb_167802_010 Hb_009393_010--Hb_167802_010 Hb_002475_110 Hb_002475_110 Hb_009393_010--Hb_002475_110 Hb_000134_010 Hb_000134_010 Hb_009393_010--Hb_000134_010 Hb_000984_120--Hb_011609_060 Hb_091826_010 Hb_091826_010 Hb_000984_120--Hb_091826_010 Hb_000318_320 Hb_000318_320 Hb_000984_120--Hb_000318_320 Hb_085910_010 Hb_085910_010 Hb_000984_120--Hb_085910_010 Hb_005040_010 Hb_005040_010 Hb_011609_060--Hb_005040_010 Hb_165552_020 Hb_165552_020 Hb_011609_060--Hb_165552_020 Hb_012753_100 Hb_012753_100 Hb_011609_060--Hb_012753_100 Hb_023502_010--Hb_000206_280 Hb_023502_010--Hb_007235_040 Hb_023502_010--Hb_010028_010 Hb_003938_150 Hb_003938_150 Hb_023502_010--Hb_003938_150 Hb_007556_010 Hb_007556_010 Hb_023502_010--Hb_007556_010 Hb_070850_010 Hb_070850_010 Hb_023502_010--Hb_070850_010 Hb_000206_280--Hb_007235_040 Hb_000206_280--Hb_010028_010 Hb_000206_280--Hb_003938_150 Hb_000206_280--Hb_007556_010 Hb_000206_280--Hb_070850_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0280518 3.20648 0.0894079 1.16542 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis