Hb_171284_010

Information

Type -
Description -
Location Contig171284: 9746-11833
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_171284_010 0.0 - - -
2 Hb_001205_070 0.1271293343 - - PREDICTED: vam6/Vps39-like protein [Jatropha curcas]
3 Hb_022216_020 0.134714743 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_000445_180 0.1368063196 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At4g08455 [Jatropha curcas]
5 Hb_000621_080 0.1369445707 - - conserved hypothetical protein [Ricinus communis]
6 Hb_018790_060 0.1382928845 - - hypothetical protein JCGZ_21628 [Jatropha curcas]
7 Hb_000061_370 0.1390336128 - - PREDICTED: zinc finger RNA-binding protein [Vitis vinifera]
8 Hb_002150_080 0.1429668228 - - ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
9 Hb_002085_110 0.1459165278 - - Protein transport protein Sec61 subunit beta, putative [Ricinus communis]
10 Hb_006502_070 0.1462765664 - - separase, putative [Ricinus communis]
11 Hb_006775_090 0.1474998197 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
12 Hb_000529_020 0.1481147899 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
13 Hb_002685_170 0.1482586042 - - hypothetical protein EUTSA_v10019281mg [Eutrema salsugineum]
14 Hb_001442_020 0.1495044333 - - unknown [Populus trichocarpa]
15 Hb_003462_030 0.1500178634 - - hypothetical protein UMN_5210_01, partial [Pinus radiata]
16 Hb_001534_050 0.1509911841 - - PREDICTED: uncharacterized protein LOC105642299 [Jatropha curcas]
17 Hb_009615_150 0.1517523525 - - PREDICTED: transcription elongation factor SPT4 homolog 2 [Jatropha curcas]
18 Hb_000252_150 0.1519315599 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003078_040 0.1522841367 - - PREDICTED: hit family protein 1 isoform X1 [Jatropha curcas]
20 Hb_001377_290 0.1523891525 - - PREDICTED: cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_171284_010 Hb_171284_010 Hb_001205_070 Hb_001205_070 Hb_171284_010--Hb_001205_070 Hb_022216_020 Hb_022216_020 Hb_171284_010--Hb_022216_020 Hb_000445_180 Hb_000445_180 Hb_171284_010--Hb_000445_180 Hb_000621_080 Hb_000621_080 Hb_171284_010--Hb_000621_080 Hb_018790_060 Hb_018790_060 Hb_171284_010--Hb_018790_060 Hb_000061_370 Hb_000061_370 Hb_171284_010--Hb_000061_370 Hb_001205_070--Hb_018790_060 Hb_002631_060 Hb_002631_060 Hb_001205_070--Hb_002631_060 Hb_001488_070 Hb_001488_070 Hb_001205_070--Hb_001488_070 Hb_003376_350 Hb_003376_350 Hb_001205_070--Hb_003376_350 Hb_000413_010 Hb_000413_010 Hb_001205_070--Hb_000413_010 Hb_000061_420 Hb_000061_420 Hb_001205_070--Hb_000061_420 Hb_003976_010 Hb_003976_010 Hb_022216_020--Hb_003976_010 Hb_001377_290 Hb_001377_290 Hb_022216_020--Hb_001377_290 Hb_022216_020--Hb_018790_060 Hb_002835_410 Hb_002835_410 Hb_022216_020--Hb_002835_410 Hb_000174_090 Hb_000174_090 Hb_022216_020--Hb_000174_090 Hb_007426_230 Hb_007426_230 Hb_022216_020--Hb_007426_230 Hb_000031_060 Hb_000031_060 Hb_000445_180--Hb_000031_060 Hb_005941_040 Hb_005941_040 Hb_000445_180--Hb_005941_040 Hb_009615_150 Hb_009615_150 Hb_000445_180--Hb_009615_150 Hb_000224_170 Hb_000224_170 Hb_000445_180--Hb_000224_170 Hb_126643_020 Hb_126643_020 Hb_000445_180--Hb_126643_020 Hb_001623_420 Hb_001623_420 Hb_000445_180--Hb_001623_420 Hb_000923_020 Hb_000923_020 Hb_000621_080--Hb_000923_020 Hb_002495_070 Hb_002495_070 Hb_000621_080--Hb_002495_070 Hb_004722_060 Hb_004722_060 Hb_000621_080--Hb_004722_060 Hb_002150_080 Hb_002150_080 Hb_000621_080--Hb_002150_080 Hb_086639_070 Hb_086639_070 Hb_000621_080--Hb_086639_070 Hb_001610_110 Hb_001610_110 Hb_000621_080--Hb_001610_110 Hb_018790_060--Hb_000061_420 Hb_000009_160 Hb_000009_160 Hb_018790_060--Hb_000009_160 Hb_001123_230 Hb_001123_230 Hb_018790_060--Hb_001123_230 Hb_018790_060--Hb_000224_170 Hb_005147_090 Hb_005147_090 Hb_018790_060--Hb_005147_090 Hb_015746_010 Hb_015746_010 Hb_000061_370--Hb_015746_010 Hb_001677_210 Hb_001677_210 Hb_000061_370--Hb_001677_210 Hb_002043_190 Hb_002043_190 Hb_000061_370--Hb_002043_190 Hb_001404_100 Hb_001404_100 Hb_000061_370--Hb_001404_100 Hb_000327_120 Hb_000327_120 Hb_000061_370--Hb_000327_120 Hb_006502_070 Hb_006502_070 Hb_000061_370--Hb_006502_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10484 0.0993167 0.0685324 0.0573567 0.146793 0.081263
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.145326 0.137203 0.129186 0.0820809 0

CAGE analysis