Hb_172112_010

Information

Type -
Description -
Location Contig172112: 12577-13084
Sequence    

Annotation

kegg
ID rcu:RCOM_1502630
description ankyrin repeat-containing protein, putative
nr
ID KDP22491.1
description hypothetical protein JCGZ_26322 [Jatropha curcas]
swissprot
ID Q9ZU96
description Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1
trembl
ID A0A067JF07
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26322 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_172112_010 0.0 - - hypothetical protein JCGZ_26322 [Jatropha curcas]
2 Hb_001650_010 0.2187156191 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
3 Hb_098466_010 0.2303456489 - - PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
4 Hb_137153_010 0.2549671289 - - -
5 Hb_178607_010 0.2586142504 - - PREDICTED: uncharacterized protein LOC105789535 [Gossypium raimondii]
6 Hb_005656_060 0.3209181014 - - -
7 Hb_000060_120 0.3213532629 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
8 Hb_000419_090 0.3298636306 - - hypothetical protein JCGZ_18532 [Jatropha curcas]
9 Hb_041774_010 0.336639409 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
10 Hb_010317_020 0.342364675 - - PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Jatropha curcas]
11 Hb_000322_110 0.3537428822 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Jatropha curcas]
12 Hb_062482_010 0.3632890453 - - -
13 Hb_000590_040 0.3659728787 - - hypothetical protein MPER_09217 [Moniliophthora perniciosa FA553]
14 Hb_010626_020 0.3681396899 - - -
15 Hb_002890_230 0.3789232937 - - hypothetical protein MTR_5g084920 [Medicago truncatula]
16 Hb_000370_010 0.3791753004 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
17 Hb_000032_300 0.3800417463 - - hypothetical protein JCGZ_20455 [Jatropha curcas]
18 Hb_010620_010 0.3810629377 - - hypothetical protein JCGZ_22570 [Jatropha curcas]
19 Hb_000544_140 0.3832410559 - - PREDICTED: uncharacterized protein LOC101245866 [Solanum lycopersicum]
20 Hb_004650_020 0.3846254594 - - -

Gene co-expression network

sample Hb_172112_010 Hb_172112_010 Hb_001650_010 Hb_001650_010 Hb_172112_010--Hb_001650_010 Hb_098466_010 Hb_098466_010 Hb_172112_010--Hb_098466_010 Hb_137153_010 Hb_137153_010 Hb_172112_010--Hb_137153_010 Hb_178607_010 Hb_178607_010 Hb_172112_010--Hb_178607_010 Hb_005656_060 Hb_005656_060 Hb_172112_010--Hb_005656_060 Hb_000060_120 Hb_000060_120 Hb_172112_010--Hb_000060_120 Hb_000544_140 Hb_000544_140 Hb_001650_010--Hb_000544_140 Hb_010626_020 Hb_010626_020 Hb_001650_010--Hb_010626_020 Hb_005735_010 Hb_005735_010 Hb_001650_010--Hb_005735_010 Hb_001650_010--Hb_005656_060 Hb_002890_230 Hb_002890_230 Hb_001650_010--Hb_002890_230 Hb_098466_010--Hb_137153_010 Hb_041774_010 Hb_041774_010 Hb_098466_010--Hb_041774_010 Hb_001767_020 Hb_001767_020 Hb_098466_010--Hb_001767_020 Hb_098466_010--Hb_005656_060 Hb_023323_010 Hb_023323_010 Hb_098466_010--Hb_023323_010 Hb_137153_010--Hb_041774_010 Hb_128287_010 Hb_128287_010 Hb_137153_010--Hb_128287_010 Hb_108404_010 Hb_108404_010 Hb_137153_010--Hb_108404_010 Hb_000204_180 Hb_000204_180 Hb_137153_010--Hb_000204_180 Hb_025457_010 Hb_025457_010 Hb_178607_010--Hb_025457_010 Hb_000590_040 Hb_000590_040 Hb_178607_010--Hb_000590_040 Hb_010317_020 Hb_010317_020 Hb_178607_010--Hb_010317_020 Hb_067188_010 Hb_067188_010 Hb_178607_010--Hb_067188_010 Hb_002232_450 Hb_002232_450 Hb_178607_010--Hb_002232_450 Hb_000457_160 Hb_000457_160 Hb_005656_060--Hb_000457_160 Hb_005867_080 Hb_005867_080 Hb_005656_060--Hb_005867_080 Hb_022288_020 Hb_022288_020 Hb_005656_060--Hb_022288_020 Hb_005656_060--Hb_041774_010 Hb_005656_060--Hb_001767_020 Hb_010317_030 Hb_010317_030 Hb_005656_060--Hb_010317_030 Hb_000419_090 Hb_000419_090 Hb_000060_120--Hb_000419_090 Hb_000060_120--Hb_178607_010 Hb_086639_130 Hb_086639_130 Hb_000060_120--Hb_086639_130 Hb_002644_030 Hb_002644_030 Hb_000060_120--Hb_002644_030 Hb_159555_010 Hb_159555_010 Hb_000060_120--Hb_159555_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.126945 0.182554
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.206475 0 0

CAGE analysis