Hb_172632_130

Information

Type -
Description -
Location Contig172632: 85109-85876
Sequence    

Annotation

kegg
ID pop:POPTR_0008s00540g
description POPTRDRAFT_765019; hypothetical protein
nr
ID KDP25049.1
description hypothetical protein JCGZ_22584 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22584 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_172632_130 0.0 - - hypothetical protein JCGZ_22584 [Jatropha curcas]
2 Hb_008494_030 0.1294528724 - - catalytic, putative [Ricinus communis]
3 Hb_001148_060 0.1379003178 - - hypothetical protein JCGZ_00278 [Jatropha curcas]
4 Hb_001999_320 0.1400102426 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA [Jatropha curcas]
5 Hb_105033_010 0.1438002139 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X2 [Jatropha curcas]
6 Hb_021409_070 0.1513605234 - - PREDICTED: transcription factor bHLH157 isoform X1 [Jatropha curcas]
7 Hb_000270_830 0.1525693267 - - aldehyde dehydrogenase, putative [Ricinus communis]
8 Hb_000487_370 0.1530201652 - - -
9 Hb_000680_010 0.1561674644 - - PREDICTED: putative hydrolase C777.06c [Populus euphratica]
10 Hb_000422_080 0.1632004701 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FB isoform X1 [Jatropha curcas]
11 Hb_003849_160 0.1643143022 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
12 Hb_000665_270 0.1659492669 - - PREDICTED: adenine phosphoribosyltransferase 5 [Jatropha curcas]
13 Hb_000808_110 0.1663863746 - - PREDICTED: uncharacterized protein LOC105647448 isoform X4 [Jatropha curcas]
14 Hb_001021_210 0.1675894953 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
15 Hb_005357_110 0.1682349173 - - hypothetical protein B456_002G083000 [Gossypium raimondii]
16 Hb_003020_250 0.1687642925 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 2 [Jatropha curcas]
17 Hb_000000_310 0.169208528 - - metalloendopeptidase, putative [Ricinus communis]
18 Hb_004052_110 0.1693100672 - - PREDICTED: host cell factor 2 isoform X1 [Jatropha curcas]
19 Hb_000099_170 0.1701744648 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
20 Hb_002759_100 0.1705847685 - - hypothetical protein JCGZ_21777 [Jatropha curcas]

Gene co-expression network

sample Hb_172632_130 Hb_172632_130 Hb_008494_030 Hb_008494_030 Hb_172632_130--Hb_008494_030 Hb_001148_060 Hb_001148_060 Hb_172632_130--Hb_001148_060 Hb_001999_320 Hb_001999_320 Hb_172632_130--Hb_001999_320 Hb_105033_010 Hb_105033_010 Hb_172632_130--Hb_105033_010 Hb_021409_070 Hb_021409_070 Hb_172632_130--Hb_021409_070 Hb_000270_830 Hb_000270_830 Hb_172632_130--Hb_000270_830 Hb_001663_130 Hb_001663_130 Hb_008494_030--Hb_001663_130 Hb_004158_050 Hb_004158_050 Hb_008494_030--Hb_004158_050 Hb_001623_490 Hb_001623_490 Hb_008494_030--Hb_001623_490 Hb_008494_030--Hb_001999_320 Hb_003849_160 Hb_003849_160 Hb_008494_030--Hb_003849_160 Hb_003687_080 Hb_003687_080 Hb_008494_030--Hb_003687_080 Hb_002759_100 Hb_002759_100 Hb_001148_060--Hb_002759_100 Hb_005305_120 Hb_005305_120 Hb_001148_060--Hb_005305_120 Hb_001148_060--Hb_021409_070 Hb_001148_060--Hb_000270_830 Hb_007793_050 Hb_007793_050 Hb_001148_060--Hb_007793_050 Hb_001059_060 Hb_001059_060 Hb_001999_320--Hb_001059_060 Hb_001999_320--Hb_003849_160 Hb_003912_080 Hb_003912_080 Hb_001999_320--Hb_003912_080 Hb_004052_110 Hb_004052_110 Hb_001999_320--Hb_004052_110 Hb_002259_220 Hb_002259_220 Hb_001999_320--Hb_002259_220 Hb_009078_020 Hb_009078_020 Hb_001999_320--Hb_009078_020 Hb_005532_020 Hb_005532_020 Hb_105033_010--Hb_005532_020 Hb_002675_080 Hb_002675_080 Hb_105033_010--Hb_002675_080 Hb_000271_220 Hb_000271_220 Hb_105033_010--Hb_000271_220 Hb_000422_080 Hb_000422_080 Hb_105033_010--Hb_000422_080 Hb_000042_050 Hb_000042_050 Hb_105033_010--Hb_000042_050 Hb_014361_090 Hb_014361_090 Hb_105033_010--Hb_014361_090 Hb_003740_020 Hb_003740_020 Hb_021409_070--Hb_003740_020 Hb_000566_010 Hb_000566_010 Hb_021409_070--Hb_000566_010 Hb_003680_220 Hb_003680_220 Hb_021409_070--Hb_003680_220 Hb_000007_090 Hb_000007_090 Hb_021409_070--Hb_000007_090 Hb_005665_090 Hb_005665_090 Hb_021409_070--Hb_005665_090 Hb_000414_080 Hb_000414_080 Hb_021409_070--Hb_000414_080 Hb_000270_710 Hb_000270_710 Hb_000270_830--Hb_000270_710 Hb_025045_010 Hb_025045_010 Hb_000270_830--Hb_025045_010 Hb_000997_290 Hb_000997_290 Hb_000270_830--Hb_000997_290 Hb_027380_150 Hb_027380_150 Hb_000270_830--Hb_027380_150 Hb_001969_130 Hb_001969_130 Hb_000270_830--Hb_001969_130 Hb_000487_370 Hb_000487_370 Hb_000270_830--Hb_000487_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.1538 2.30197 3.96607 4.03514 0.501701 0.667811
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.712689 0.72846 0.10097 0.908569 4.81649

CAGE analysis