Hb_172979_010

Information

Type -
Description -
Location Contig172979: 8645-10149
Sequence    

Annotation

kegg
ID rcu:RCOM_0813630
description hypothetical protein
nr
ID XP_012066880.1
description PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
swissprot
ID Q93YN0
description Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1
trembl
ID A0A067LE01
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01623 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_172979_010 0.0 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
2 Hb_012633_050 0.0772657583 - - zinc finger protein, putative [Ricinus communis]
3 Hb_017193_010 0.0863872226 - - PREDICTED: lactation elevated protein 1 isoform X1 [Jatropha curcas]
4 Hb_000076_210 0.0916957855 - - PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Jatropha curcas]
5 Hb_003687_120 0.094617566 - - PREDICTED: serine/threonine-protein kinase tricorner-like [Jatropha curcas]
6 Hb_000120_890 0.0955955244 - - PREDICTED: phosphoinositide phosphatase SAC6 [Jatropha curcas]
7 Hb_000160_140 0.0969209869 - - PREDICTED: ELL-associated factor 2-like isoform X1 [Jatropha curcas]
8 Hb_000723_030 0.0970102635 transcription factor TF Family: E2F-DP PREDICTED: transcription factor-like protein DPB isoform X1 [Jatropha curcas]
9 Hb_012799_150 0.098669253 - - PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing protein 13 [Jatropha curcas]
10 Hb_000579_080 0.1005927283 - - PREDICTED: 26S protease regulatory subunit S10B homolog B [Jatropha curcas]
11 Hb_001504_010 0.101046086 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
12 Hb_002203_030 0.1011631095 transcription factor TF Family: NF-YB PREDICTED: protein Dr1 homolog isoform X2 [Jatropha curcas]
13 Hb_001300_280 0.1019587583 - - PREDICTED: mitochondrial substrate carrier family protein ucpB [Jatropha curcas]
14 Hb_029622_120 0.1024327979 - - PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Jatropha curcas]
15 Hb_008304_020 0.1033220549 - - PREDICTED: ATP-dependent RNA helicase DBP2-like [Jatropha curcas]
16 Hb_001635_110 0.1052732968 - - PREDICTED: NADP-specific glutamate dehydrogenase [Jatropha curcas]
17 Hb_178968_060 0.1058993125 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
18 Hb_000229_050 0.1071252159 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
19 Hb_000243_120 0.109648315 - - PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]
20 Hb_003470_040 0.1102155814 - - PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_172979_010 Hb_172979_010 Hb_012633_050 Hb_012633_050 Hb_172979_010--Hb_012633_050 Hb_017193_010 Hb_017193_010 Hb_172979_010--Hb_017193_010 Hb_000076_210 Hb_000076_210 Hb_172979_010--Hb_000076_210 Hb_003687_120 Hb_003687_120 Hb_172979_010--Hb_003687_120 Hb_000120_890 Hb_000120_890 Hb_172979_010--Hb_000120_890 Hb_000160_140 Hb_000160_140 Hb_172979_010--Hb_000160_140 Hb_001504_010 Hb_001504_010 Hb_012633_050--Hb_001504_010 Hb_000579_080 Hb_000579_080 Hb_012633_050--Hb_000579_080 Hb_006438_020 Hb_006438_020 Hb_012633_050--Hb_006438_020 Hb_000229_050 Hb_000229_050 Hb_012633_050--Hb_000229_050 Hb_008206_080 Hb_008206_080 Hb_012633_050--Hb_008206_080 Hb_002871_040 Hb_002871_040 Hb_017193_010--Hb_002871_040 Hb_101334_020 Hb_101334_020 Hb_017193_010--Hb_101334_020 Hb_001623_500 Hb_001623_500 Hb_017193_010--Hb_001623_500 Hb_003835_110 Hb_003835_110 Hb_017193_010--Hb_003835_110 Hb_017193_010--Hb_000579_080 Hb_008304_020 Hb_008304_020 Hb_000076_210--Hb_008304_020 Hb_000742_010 Hb_000742_010 Hb_000076_210--Hb_000742_010 Hb_001300_280 Hb_001300_280 Hb_000076_210--Hb_001300_280 Hb_001635_110 Hb_001635_110 Hb_000076_210--Hb_001635_110 Hb_000076_210--Hb_000120_890 Hb_003470_040 Hb_003470_040 Hb_003687_120--Hb_003470_040 Hb_008725_050 Hb_008725_050 Hb_003687_120--Hb_008725_050 Hb_003428_090 Hb_003428_090 Hb_003687_120--Hb_003428_090 Hb_000723_030 Hb_000723_030 Hb_003687_120--Hb_000723_030 Hb_000890_160 Hb_000890_160 Hb_003687_120--Hb_000890_160 Hb_178968_060 Hb_178968_060 Hb_003687_120--Hb_178968_060 Hb_003498_100 Hb_003498_100 Hb_000120_890--Hb_003498_100 Hb_000476_060 Hb_000476_060 Hb_000120_890--Hb_000476_060 Hb_000120_890--Hb_001504_010 Hb_000120_890--Hb_178968_060 Hb_000120_890--Hb_008304_020 Hb_018790_020 Hb_018790_020 Hb_000120_890--Hb_018790_020 Hb_004225_060 Hb_004225_060 Hb_000160_140--Hb_004225_060 Hb_000160_140--Hb_000723_030 Hb_002203_030 Hb_002203_030 Hb_000160_140--Hb_002203_030 Hb_000230_460 Hb_000230_460 Hb_000160_140--Hb_000230_460 Hb_010287_020 Hb_010287_020 Hb_000160_140--Hb_010287_020 Hb_000137_010 Hb_000137_010 Hb_000160_140--Hb_000137_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.3475 4.86882 10.083 3.82832 2.15119 1.25295
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.66165 3.442 2.29133 5.34841 5.93757

CAGE analysis